Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag0232 | ATGAGTGTTTCACTAACGTCTCTACCACTTTTGATAGCTTTTGCAGGCATATTAACATGTGCATGGAAAGTTGTAGACTGGATTTGGCTGCGCCCCAAGAAGTTGGAAAAGATTCTTAGAGACCAAGGTCTGGCCGGAAACTCTTACCGGCTTTACTATGGAGACATGAAGGAGAATGGCATGCTTCTACAACAAGCAACTTCAAGGCCTATGAAATTCTCGCATGACACTGTACACCGATCACATCCCCTCCTTCAACAAAATGTCAAAACTTACGGGAAGGATTGTTTTACGTGGCTCGGCCCAACACCATGTGTGAACATTATGGACCCTCCACTAATGAAAGCTGTTTTTACCAAACTGGATGATTTTTACAAACCAAGTTTGAATCCCCTTCTGAAGTTCCTAGTGTATGGCCTTCTTGGAAACAATGGAGATGAGTGGGCTTATCATAGAAAGATAATCAACACGGCCTTCCAGTCCGAGAAGCTAAAGAATATGATACCGGCATTCTATCATAGCATTAGCGAGATAATAAGCAAATGGGAAAGGATGGCGGCAGCAGAGGAACCATTGGAATTAGATGTGTTCCCTTTTATGCAAGAGTTGACAAGTGATGCTATTGCTCGCACTTCGTTCGGAAGTAGCCACAGAGAAGGCTTCAAGATTTTCAAGCTTGTAGAAGAGCAAATACAACTCACCAGCAAAGCTGTACAAGGCGTTTATATTCCTGGATGGAGGTTTGTACCTACGAAGATGAACAAGAGGTTGAAGGCAATTGATAAGGAAATAAAAACTAGTCTAAAGGATATAATTAAGAAAAGAGAGAAAGCAATCAAGGCAGGTGAAGCCAGTAACGATGATCTATTAAGTATGTTGATTCAATCTAATTTGAATGACATAAAAGAAAATGGAAGCAACAAAAACTTAAGAATGAGTATTGGAGATGTAATCGACGAATGCAAGGTATTTTATGTTGCTGGCCAAGAGACGACTGCACTGCTGCTTAGTTGGGCCATGGTTTTACTCGGTAAATATACGGAATGGCAAGATCGAGCAAGAGAAGAAGTCTTAAGAGCTTTCGGTAAAAGCAAACCAGAATTCGATGGTCTGAATCACCTCAAAGTTGTTAGTGCGATTCTCTACGAGGTGCTTAGGCTATATCCGGCCTTAACTCAAATCACCCGAGTAGTTAAAAAGGAAACAACGCTCGGAAAATGGACATTGCCAGCCGGAGTAATGATAGGAGTCCCGGTTGTCCTGATCCATGTTGATAAGGAATTGTGGGGCGATGATGCATACGAGTTTAAACCGGAAAGATTTGCAGAGGGAGTTTCAAAGGCTACGAAGAACCCTCTCGGATACTTGCCATTCGCGGGGGGGCCTCGAATTTGTATTGGCCAAAACTTTGCTCTGATGGAAGCCAAATTAGCTTTGGCCATGATTTTACAACGCTTCTCGTTTGAGCTCTCGCCGTCATATGCTCATGGTCCCATCAATGTCATGACTTTTCGACCACAGTATGGTGCTCATATCTTAGTACACAAACTGTAG | 1554 | 42.6 | MSVSLTSLPLLIAFAGILTCAWKVVDWIWLRPKKLEKILRDQGLAGNSYRLYYGDMKENGMLLQQATSRPMKFSHDTVHRSHPLLQQNVKTYGKDCFTWLGPTPCVNIMDPPLMKAVFTKLDDFYKPSLNPLLKFLVYGLLGNNGDEWAYHRKIINTAFQSEKLKNMIPAFYHSISEIISKWERMAAAEEPLELDVFPFMQELTSDAIARTSFGSSHREGFKIFKLVEEQIQLTSKAVQGVYIPGWRFVPTKMNKRLKAIDKEIKTSLKDIIKKREKAIKAGEASNDDLLSMLIQSNLNDIKENGSNKNLRMSIGDVIDECKVFYVAGQETTALLLSWAMVLLGKYTEWQDRAREEVLRAFGKSKPEFDGLNHLKVVSAILYEVLRLYPALTQITRVVKKETTLGKWTLPAGVMIGVPVVLIHVDKELWGDDAYEFKPERFAEGVSKATKNPLGYLPFAGGPRICIGQNFALMEAKLALAMILQRFSFELSPSYAHGPINVMTFRPQYGAHILVHKL | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1075634 | 1077630 | + | Conep06aG0023400.1 | Cone6ag0232 | 439116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag0232 | 517 | Gene3D | Cytochrome P450 | 71 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 509 | IPR050665 | GO:0004497(PANTHER) | |
| Cone6ag0232 | 517 | Pfam | Cytochrome P450 | 81 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 378 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | SUPERFAMILY | Cytochrome P450 | 78 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0232 | 517 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0232 | Cone-Chr6:1075634 | Cone9ag0265 | Cone-Chr9:1109986 | 1.47E-248 | dispersed | |
| Cone6ag0231 | Cone-Chr6:1071493 | Cone6ag0232 | Cone-Chr6:1075634 | 6.05E-232 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag0232 | - | - | - | 0.0 |