Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0305 ATGGCGGCGGCGGCGGGAAATGGTGGTTTGTTACTTGGCGGAGTAGGGGAACTTGGGAGGGCACATGCGGCCATGGCGATGGTGCAGTTGTTCAATGGAGGTTATCACGTTATCACCAAAGTTGCTCTCAATGTTGGGATCGATCAGCTCGTTTTCTGCCTCTTTCGCGACCTCCTGGCCCTCTCCATCCTTGCCCCCGTCGCCTATGTCCGCGACCGTGAGAAACGGGTTCGCTTGCCAATGACTAGAGACCTGCTCCTATCATTTTTCTTTCTCGGTTTAACTGGGATATTTGGAAATCAGCTTCTGTTTCTTGTTGGTCTTGGTTACACAAATCCAACATATGCTGCTGCCATACAGCCTTCAATTCCAGTCTTTACGTTTCTCCTTGCTACTATAATGGGTACAGAAAGAGTAAACTTGCTCAAGTTTGAAGGTCAGGCAAAGGTTGCTGGTACACTCATCTGTGTTTGTGGGGCTACATCAATGGTCTTATTCCGTGGCCCTGCTTTGATTGGAAATGCAGAATCAGACTTTTCCTCACATAATGAGATAAGTGCCAGGGGTCAACCAGAGCCTTCTGGATGGTTAATGTCTAGTTTTCTTGAGTATGGATTGGACCATTTTCACCTTGGAGTTATATGCTTGATAGGAAACTGTATGTGCATGGCTGCTTTTCTGGCCATTCAGGCTCCAGTTTTAAAGAAGTATCCTGCCAGCCTATCAGTCACAGCATATTCATACTTTTTTGGTGCTATGTTGATGGTGATCGCCGCACTCTTTATCACCAATGAGTCGACAGACTGGAGTTTGACAAAGTCCGAGTTTTTTGCCGTCCTGTATGCTGGAATTGTGGCATCTGCCCTTAACTATGGACTCCTGACTTGGTGCAATAAGATCTTGGGGCCAGCATTGGTTGCTCTTTACAACCCACTTCAACCCGCAGCATCTGCCTTTTTATCGAGAATCTTCATCGGAAGCCCTATCTACTTGGGAAGTGTTTTCGGGGGACTTTTAATAATTGCGGGTCTTTACTTGGTGACATGGGCTTCGTATAGAGAACGGCAAGCGAATTTAGGGACGATTCTCCATGCAGGCCGGTCTGCAGAACTCCTCGTTCACAAGGAGTCACTGATTAACAGGATTTCTTCATATCCGATAGGAAACCTTTTCTCAGGACCCTCCACTACATTACCCAAATCTGTAGATTAA 1212 46.7 MAAAAGNGGLLLGGVGELGRAHAAMAMVQLFNGGYHVITKVALNVGIDQLVFCLFRDLLALSILAPVAYVRDREKRVRLPMTRDLLLSFFFLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPSIPVFTFLLATIMGTERVNLLKFEGQAKVAGTLICVCGATSMVLFRGPALIGNAESDFSSHNEISARGQPEPSGWLMSSFLEYGLDHFHLGVICLIGNCMCMAAFLAIQAPVLKKYPASLSVTAYSYFFGAMLMVIAALFITNESTDWSLTKSEFFAVLYAGIVASALNYGLLTWCNKILGPALVALYNPLQPAASAFLSRIFIGSPIYLGSVFGGLLIIAGLYLVTWASYRERQANLGTILHAGRSAELLVHKESLINRISSYPIGNLFSGPSTTLPKSVD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1399504 1402158 - Conep06aG0030900.1 Cone6ag0305 439189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0305 403 Pfam EamA-like transporter family 28 146 IPR000620 GO:0016020(InterPro)
Cone6ag0305 403 Pfam EamA-like transporter family 211 348 IPR000620 GO:0016020(InterPro)
Cone6ag0305 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 353 - -
Cone6ag0305 403 PANTHER WAT1-RELATED PROTEIN 24 355 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone6ag0305 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 58 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0305 Cone-Chr6:1399504 Cone7ag1859 Cone-Chr7:12018231 5.83E-71 dispersed
Cone6ag0305 Cone-Chr6:1399504 Cone9ag0339 Cone-Chr9:1479254 6.33E-273 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0305 - - - 0.0