Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag0312 | ATGGGTTGGCCTTATGTAGGCGAAACCTTCCAGCTCTACTCTCAAAACCCAAATGTTTTCTTTGCTTCTAAACAGAAAAGATATGGGTCAATCTTCAAGACACACATACTGGGTTGTCCCTGTGTGATGATTTCAAGCCCTGAAGCTGCAAAGTTCGTGCTTGTTACAAGAGCTCACCTCTTCAAGCCGACATTTCCTGCAAGCAAAGAAAGGATGTTGGGAAAACAGGCCATTTTCTTTCATCAAGGAGATTACCACTCCAAACTGAGAAAGCTTGTTCTTCGTGCTTTCATGCCCGAATCTATAAAAAATATAGTGCCTAGCATCGAATCAATCGCCAAACAGACTCTAAAATCATGGGAAGATCGTCAAATCAACACCTTCCAAGAAATGAAAACGTACGCATTCAATGTAGCATTCCTTTCAATATTTGGAAAGGACGAGGTCATTTACCGAGAAGATCTAAAACGATGCTACTACATTCTCGAAAAAGGGTACAATTCAATGCCCATAAATCTACCTGGAACACTGTTCCACAAATCAATGAAAGCAAGGAAAGAGCTAGCTCAGATCTTGGCCAAAATCCTATCAACTAGACGGCAAATGAAGCAAGAGCATAACGACTTGCTTGGATCTCTAATGAGCGATAAAGAAAGCCTCACCGATGAACAAATCGCAGATAACATTATTGGAGTCATATTTGCTGCTCGAGACACGACAGCAAGTGCACTAACATGGATCATTAAGTTCCTCGGACAAAATGCAAAAGTCCTTGAAGCTGTCACTTTTGAGCAAGAGAAGTTGATGGGGAAGAATGAAAATGAGGAAGACAGAGTTCTTACATGGGCAGATACTAAAAATATGCCAATTACTTCAAGAGTGATTCAAGAAACACTTAGAGTGGCCTCAATTTTGTCTTTTACTTTCAGAGAAGCTGTAGAAGATGTTGAATATGAAGGGTATCTTATACCCAAAGGGTGGAAAGTCTTACCACTGTTCAGAAACATCCATCATAACCCAGAAATCTTTCCTGAGCCTGAGAAGTTTGATCCATCAAGATTTGAGGTGGCACCGAAACCCAATACATACATGCCATTTGGCAACGGGACCCATGCATGCCCGGGCAATGAGTTGGCGAAGGTGGAAATCCTAGTCCTTCTCCATCATTTAACCACAAAGTACAGGTGGTCTATGGTGGGAGAGCAGGATGGCATTCAATATGCACCTTTTTCGCTCCCCCAGAATGGATTGCCCATTGCTTTCTCTCTCAAGCCATAA | 1278 | 42.02 | MGWPYVGETFQLYSQNPNVFFASKQKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASKERMLGKQAIFFHQGDYHSKLRKLVLRAFMPESIKNIVPSIESIAKQTLKSWEDRQINTFQEMKTYAFNVAFLSIFGKDEVIYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSTRRQMKQEHNDLLGSLMSDKESLTDEQIADNIIGVIFAARDTTASALTWIIKFLGQNAKVLEAVTFEQEKLMGKNENEEDRVLTWADTKNMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNPEIFPEPEKFDPSRFEVAPKPNTYMPFGNGTHACPGNELAKVEILVLLHHLTTKYRWSMVGEQDGIQYAPFSLPQNGLPIAFSLKP | 425 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1447298 | 1449304 | + | Conep06aG0031600.1 | Cone6ag0312 | 439196 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag0312 | 425 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 366 | 375 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 224 | 241 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 244 | 270 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 373 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 292 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 332 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | E-class P450 group I signature | 363 | 373 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | Pfam | Cytochrome P450 | 2 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | Gene3D | Cytochrome P450 | 1 | 423 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | CDD | CYP90-like | 25 | 419 | - | - | |
| Cone6ag0312 | 425 | PRINTS | P450 superfamily signature | 235 | 252 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | P450 superfamily signature | 293 | 304 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | PRINTS | P450 superfamily signature | 364 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0312 | 425 | FunFam | Abscisic acid 8 | 1 | 423 | - | - | |
| Cone6ag0312 | 425 | PANTHER | CYTOCHROME P450 26 | 1 | 398 | - | GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cone6ag0312 | 425 | SUPERFAMILY | Cytochrome P450 | 2 | 421 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0651 | Cone-Chr15:3418954 | Cone6ag0312 | Cone-Chr6:1447298 | 2.12E-30 | dispersed | |
| Cone6ag0312 | Cone-Chr6:1447298 | Cone7ag1082 | Cone-Chr7:8217629 | 8.33E-192 | dispersed | |
| Cone4ag1509 | Cone-Chr4:11725811 | Cone6ag0312 | Cone-Chr6:1447298 | 4.75E-34 | transposed | |
| Cone6ag0312 | Cone-Chr6:1447298 | Cone9ag0347 | Cone-Chr9:1528409 | 1.66E-302 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag0312 | K09843 | - | cit:102613470 | 740.339 |