Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0362 ATGACTCTGTCTGCTACCTTCATCAACGCCTTCAAATCCTCAGAGCACATCTCATGGAAATCTACCGGTAGGCTGCAGCAAACCATCGCGGGATGTATAGAGCGTCAAGGTACAACTCTTCATTCCGGAAACGTTTCGAAGGTGAGATTGTGGCCGGAGGTTGCAACCAGAGGGAGGTACTTTGATTTTCGCTCCAATTTGATTCCTGCTTCGATCGATTACGTACAGCAGTCGCCTCTGTGTACTACGCTCTGTAAGGATGGGGTTCGGATTCGAACGGTTGAGCATTTGCTTTCTGCTTTGGAGGCTACGGGCGTTGATAATTGCAGGATCGAGATAGCTGATGAGGACTCTGAAGATGGCGAAGTTGAGGTTCCTATTCTTGATGGGTCGGCAAGTGAGTGGGTAGAGGCAATAAAAGAAGTTGGTCTAAAGGTGGCCATTGATCAATGTGGCAAGGGCTGTGAAAAATTGGCACCCTGTTTACATAAACCAGTGCATGTGTGGAAGAATGATTCTTTTGTGGCTGCGTTCCCTGCACCAGCCGTTCAAATTACCTATGGAATTGACTACCCACAGGTTCCCGACATAGGCCGCCAATGGTTTTCTACTGTGCTTTTGGATGATGGTCCCTATGCAGGGGAGATAGCTTCATCAAGAACCTTTTGCATATACGAGGAGGTGGAGCATATGCGCAACAAAGGACTCATCAAAGGGGGCTCACTAGAAAATGCCATAGTTTGTAGTGTGACGAAGGGTTGGCTGAACCTGCCACTGCATTTCCATGATGAACCTTGTCGCCATAAGGTGTTAGATCTCATTGGTGACCTTTCCCTTTTTGCGCGATATGGCAGTCAGGGGATTCCCCTGTCTCATGTAGTGGTTTACAAGGGTGGCCATGCACTACATGCTGATCTGGTACGCCGCTTATCTGAAATTGTTTGA 945 48.04 MTLSATFINAFKSSEHISWKSTGRLQQTIAGCIERQGTTLHSGNVSKVRLWPEVATRGRYFDFRSNLIPASIDYVQQSPLCTTLCKDGVRIRTVEHLLSALEATGVDNCRIEIADEDSEDGEVEVPILDGSASEWVEAIKEVGLKVAIDQCGKGCEKLAPCLHKPVHVWKNDSFVAAFPAPAVQITYGIDYPQVPDIGRQWFSTVLLDDGPYAGEIASSRTFCIYEEVEHMRNKGLIKGGSLENAIVCSVTKGWLNLPLHFHDEPCRHKVLDLIGDLSLFARYGSQGIPLSHVVVYKGGHALHADLVRRLSEIV 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1772232 1775973 - Conep06aG0037000.1 Cone6ag0362 439246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0362 314 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 26 311 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone6ag0362 314 Gene3D lpxc deacetylase, domain 2 161 313 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone6ag0362 314 Gene3D lpxc deacetylase, domain 1 24 150 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone6ag0362 314 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 26 310 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone6ag0362 314 SUPERFAMILY Ribosomal protein S5 domain 2-like 164 311 IPR020568 -
Cone6ag0362 314 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 312 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone6ag0362 314 SUPERFAMILY Ribosomal protein S5 domain 2-like 25 145 IPR020568 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0362 Cone-Chr6:1772232 Cone9ag0393 Cone-Chr9:1807930 9.88E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0362 K02535 - csv:101205101 464.536