Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0383 ATGGCCACTATTATCTCCATTATTTTGCTTTCCCATTTTCTTCTATCTTCACTCATCTGGCCGGTGACACACGGTGGTGGCACTGATCTTCCATGCAACCAAACCCCATACCCTAAAGTTTGCAACCAATACATGGTCACCAATAACAACCATAATCTTTTCGAAAACCTTGATCTTAAAACCAAACAGTACACGTTTCGTGACCTATCATTTCACGTAAGCATGCATCAAGCCATGCAAGTTTACCACCATCTTTTGTCCACCATGGAAGTAAATACTAATGCATTCGGTGATCACGATCATGATCAGCGAACCAAGTCAGCATGGGTTGATTGTTTAGAGCTCTATGAAGACACCATTAACAATCTAAACCGTTCGATTATGACCACCTCCAAATCAAACCCAATAGACCACTTGACATGGTTAAGTGCATCAATCACAAATCATCAAACATGTCAGAATGGTTTTCTCGACTTCAATATTGATCCTCATCAAACACAATCCTTTCCTTCTGTACTAGTTAATGACCTATCTAAGCTTCTTAGCAATTCTCTTGCGTTGACCAAGTCTTATAACAAGAAACAAGTAACGATTAGAGGACGTCGCCGTTTGCTTATTTCCGATCGTCATGATGGCCGTTTTCCGGAATGGGTTTCTCGAGCCGATAGAAAGCTTCTTCAATCGGAAGAAAAGCCAGTCAATACCATAAAGGCTGATTTAGTAGTAGCTCAAGATGGGTCGGGGAACCATAAAACGATTTCAGAGGCTGTGGAAGCGTCTGAGGAGGTAGGAAGTGGGAGTGAGAGATTTGTTATATACGTGAAAGCGGGTGTTTATGAAGAGAATGTAGAGATTAAGAAGACTATGAGAAATATTATGATTGTTGGAGATGGAATTGGGTCTACCATTGTGACTGGTAAAAAGAACAAGAACGATGGGTCAACTACGTATGGATCAGCCACTTTTGGGGTATCTGGTGATGGATTCATGGCTCGAGATATATCCTTTGAAAACACAGCTGGACCGGAAAAAGAACAAGCAGTAGCTCTTCGATCAGGTTCCGATCTATCGGTTTTCTATCGATGCAGCTTCAAAGGCTACCAGGATACCTTATACGTCTATTCTCAACGCCAGTTCTATCGTGACTGCGATATCTATGGAACCATAGATTTCATATTCGGCGATGCGGTCACTGTCCTCCAAAACTGCAATATTTATGTCCGGAAACCCTTGGACAAACAGAAAAACACAATCACGGCGCAGGCGAGGACCGACCCGAATGAAAACACGGGCATCATTATCCATAAGTGTAGGATCACGGCTTCATCGGATTTAAAACCTGAACAAAATTCGTACAAGACTTATCTTGGTAGGCCATGGCAGGAATACTCGAGGGTTGTGATAATGAAAAGTCTTATGGATGGGGTGGTTGACCCAGCGGGGTGGCTACCGTGGAGTGGTGATTTTGGATTGACAACGCTATACTACGGCGAGTTTATGAACAGTGGAAGTGGTGCAAGTGTTGATGGTAGAGTTACGTGGGAAGGTTACCATGTTATAAGCAGCGCTTCAGAGGCTGGGGAATTTACGGTTGGGAATTTCTTGGATGGAGATTCATGGATTCCTGGAACTGGAGTTCCATTTGAAGCTGGGTTGTAA 1659 43.1 MATIISIILLSHFLLSSLIWPVTHGGGTDLPCNQTPYPKVCNQYMVTNNNHNLFENLDLKTKQYTFRDLSFHVSMHQAMQVYHHLLSTMEVNTNAFGDHDHDQRTKSAWVDCLELYEDTINNLNRSIMTTSKSNPIDHLTWLSASITNHQTCQNGFLDFNIDPHQTQSFPSVLVNDLSKLLSNSLALTKSYNKKQVTIRGRRRLLISDRHDGRFPEWVSRADRKLLQSEEKPVNTIKADLVVAQDGSGNHKTISEAVEASEEVGSGSERFVIYVKAGVYEENVEIKKTMRNIMIVGDGIGSTIVTGKKNKNDGSTTYGSATFGVSGDGFMARDISFENTAGPEKEQAVALRSGSDLSVFYRCSFKGYQDTLYVYSQRQFYRDCDIYGTIDFIFGDAVTVLQNCNIYVRKPLDKQKNTITAQARTDPNENTGIIIHKCRITASSDLKPEQNSYKTYLGRPWQEYSRVVIMKSLMDGVVDPAGWLPWSGDFGLTTLYYGEFMNSGSGASVDGRVTWEGYHVISSASEAGEFTVGNFLDGDSWIPGTGVPFEAGL 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1864724 1866893 + Conep06aG0039100.1 Cone6ag0383 439267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0383 552 Pfam Plant invertase/pectin methylesterase inhibitor 32 187 IPR006501 GO:0004857(InterPro)
Cone6ag0383 552 CDD PMEI-like_3 32 193 - -
Cone6ag0383 552 SUPERFAMILY Pectin lyase-like 235 551 IPR011050 -
Cone6ag0383 552 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Cone6ag0383 552 PANTHER PECTINESTERASE 8 542 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone6ag0383 552 SMART PMEI_2 23 187 IPR006501 GO:0004857(InterPro)
Cone6ag0383 552 FunFam Pectinesterase 233 552 - -
Cone6ag0383 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 191 IPR035513 -
Cone6ag0383 552 Pfam Pectinesterase 239 538 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone6ag0383 552 Gene3D - 233 552 IPR012334 -
Cone6ag0383 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 190 IPR035513 -
Cone6ag0383 552 NCBIfam pectinesterase inhibitor domain 32 190 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0592 Cone-Chr14:2935245 Cone6ag0383 Cone-Chr6:1864724 2.07E-133 dispersed
Cone5ag0054 Cone-Chr5:269828 Cone6ag0383 Cone-Chr6:1864724 5.56E-99 dispersed
Cone5ag0685 Cone-Chr5:2933931 Cone6ag0383 Cone-Chr6:1864724 1.46E-154 dispersed
Cone5ag0803 Cone-Chr5:3453279 Cone6ag0383 Cone-Chr6:1864724 3.40E-154 dispersed
Cone6ag0294 Cone-Chr6:1354882 Cone6ag0383 Cone-Chr6:1864724 1.27E-139 dispersed
Cone6ag0383 Cone-Chr6:1864724 Cone7ag0832 Cone-Chr7:6238440 7.99E-143 dispersed
Cone6ag0383 Cone-Chr6:1864724 Cone9ag0410 Cone-Chr9:1895925 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0383 - - - 0.0