Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0386 ATGAGGAGTATGTTCACGAATCTTGTTCAGATTCTTACCAAACCCGATAAATTCTGGTCTAAGAGAGAAAGAAACAATGATGAGGTTGATCTGAATCAAATTGCCCGACAGGAACAGAAGCTCTTTCTCTATGAAACCTTAGCTGCAGCTACTAACAATTTCCACCCGACACAAAAGCTCGGTGAAGGTGGCTTCGGACCAGTTTACAGGGGGAAATTGGATGATGGAAGAGAGATCGCAGTGAAGAAGCTATCATATAGTTCTAATCAAGGCAAGAGAGAGTTCTTAAACGAGGTCAAGTTGTTGGCCCGTGTACAACATCGAAATATAGTTGATTTGTTAGGATGCTGTGTCCATGGTCGAGACAAGCTCTTGGTCTATGAGTACATCTCAAACCAAAGCCTCGACAAGATTCTTTTCAAATCTAATAGCAGGAGAGAGGAGGTTGGGTGGACACAGAGGTATGAGATCATTAAGGGGGTGGCAAGGGGTTTGCTTTACCTTCATGAAGATGCACATGACATTATAATCCATCGAGACATTAAGGCCGGTAATATACTGGTTGATGACAATTGGGAACCGAAGATCGCTGATTTTGGACTAGCCCGTCTCTTCCCCGAAGACGGTCAACTTGTTTATACCCGTATAGCAGGCACAAATGGGTATATGGCTCCAGAGTATGTGATGCGTGGACAATTATCAGTGAAGGCCGACGTTTATAGTTTTGGAGTTTTGGTTCTGGAACTCATCACCGGAAAAAGAATCACTAGTTTTAAACTCTCCGATAATAATTTTGGTGCAAAGAGTCTCCTTGATTGGGCATACGAGTTTTACGAGAAAGGAAGAAGTTTAATGATTGTGGATCCAACAATACTTCAAGCTGCAACATCGGAACAAGAAGTAGAAATGTGCATTCGAATAGGGCTGCTTTGCACACAAGGAGATCCACAGCTACGTCCGACAATGCAAAGTGTCGTCGTGATGCTGTCCAAGAAACCCGGTAATAACTTGGAACAAATACCGGGTTCTCCAGGAGCGGCTGGATCTAGATACTGGAGAAGATCTGGTCCACTACTATTTACCTCGATTCCTAGAAATTCTTCTGGTTCTGGTTCAGGTTCAGGTTCTAGTAGCAAAACTACGGCTACTACTGCAACTACTACTTCACTTAGCTCCGGCTTAGACATTCGTGGAAAACACCCTATACAAGACTGA 1215 43.46 MRSMFTNLVQILTKPDKFWSKRERNNDEVDLNQIARQEQKLFLYETLAAATNNFHPTQKLGEGGFGPVYRGKLDDGREIAVKKLSYSSNQGKREFLNEVKLLARVQHRNIVDLLGCCVHGRDKLLVYEYISNQSLDKILFKSNSRREEVGWTQRYEIIKGVARGLLYLHEDAHDIIIHRDIKAGNILVDDNWEPKIADFGLARLFPEDGQLVYTRIAGTNGYMAPEYVMRGQLSVKADVYSFGVLVLELITGKRITSFKLSDNNFGAKSLLDWAYEFYEKGRSLMIVDPTILQAATSEQEVEMCIRIGLLCTQGDPQLRPTMQSVVVMLSKKPGNNLEQIPGSPGAAGSRYWRRSGPLLFTSIPRNSSGSGSGSGSSSKTTATTATTTSLSSGLDIRGKHPIQD 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1878713 1880526 - Conep06aG0039400.1 Cone6ag0386 439270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0386 404 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 354 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone6ag0386 404 Gene3D Phosphorylase Kinase; domain 1 15 129 - -
Cone6ag0386 404 CDD STKc_IRAK 60 331 - -
Cone6ag0386 404 MobiDBLite consensus disorder prediction 363 404 - -
Cone6ag0386 404 FunFam Cysteine-rich receptor-like protein kinase 10 17 129 - -
Cone6ag0386 404 MobiDBLite consensus disorder prediction 363 394 - -
Cone6ag0386 404 SMART serkin_6 54 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0386 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0386 404 Pfam Protein kinase domain 55 325 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0386 404 Gene3D Transferase(Phosphotransferase) domain 1 130 339 - -
Cone6ag0386 404 ProSiteProfiles Protein kinase domain profile. 54 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0386 404 FunFam Cysteine-rich receptor-like protein kinase 2 130 337 - -
Cone6ag0386 404 SUPERFAMILY Protein kinase-like (PK-like) 34 329 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0750 Cone-Chr19:6126358 Cone6ag0386 Cone-Chr6:1878713 1.90E-148 dispersed
Cone6ag0386 Cone-Chr6:1878713 Cone6ag1067 Cone-Chr6:6274520 1.14E-94 dispersed
Cone13ag0744 Cone-Chr13:7090410 Cone6ag0386 Cone-Chr6:1878713 1.93E-151 wgd
Cone6ag0386 Cone-Chr6:1878713 Cone9ag0413 Cone-Chr9:1912445 1.35E-234 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82915 PF13532 2OG-FeII_Oxy_2 8.90E-17 CL0029 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0386 - - - 0.0