Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0425 ATGCTATTAATTCTGCTACTCCTGCTTAATGTATTCTACTCCAATACTATAGTAACCTCTTTGAATGAAGAAGCCTCTGCTCTTTTATCCTTCAAAAACTCCATTAAAGAAGACCCAGGCGGCTCTTTGATCAACTGGAACTCTTCCGACCAAACTCCATGTTCATGGAACGGAATCACTTGCAATGACAAAAGGGTTATATCCCTCAGCCTTCCAAAATCCAACCTCCATGGATTTCTTCCATCTTCTCTAGGCTCGCTTACTCAGCTTCGTCATATAAATTTAAGGAACAATAGGTTTAATGGAACCTTGCCTAATGAGCTAGTTCAAGTTCAGGGCTTACAGAGTTTGGTTGTTTTTGGAAATTTCTTATCTGGGTCTCTTCCAAATGATATTGGCAAGCTTAAGTATCTTCAGATTCTGGATTTATCGCAGAATTTCTTCAATGGGTCGTTACCCATTTCGATTGTTCAATGCAAGAGGCTGAAAAGTTTAAGTCTTAGTAGGAACAATTTTTATGGGGTTTTACCAGATGGGTTTGGCACTAATTTGACTCGTCTTGAAAAACTTGATCTTTCTTTTAACAGGTTTAGTGGTTTTATCCCTTATGATTTGAGCAATCTGTCTAGCTTAGAAGGCACTGCTGATTTGTCACATAATCTTTTCTCTGGTTCAATCCCAGCTAGCCTTGGGAATCTCCCTGAGAAGGTATATATTGATCTTACTTACAATAACTTAACTGGTCCCATACCTCAAAATGGTGCTCTTATAAACAGAGGACCTACTGCTTTTCTTGGCAATTCAGGGCTCTGCGGCCCACCATTGAAAAACCCATGTTCTTTACAAATTCCTAACCATACCTCGCCTTCCTCCTCATCTTCATCCTTTCTCCCACATAGAAACCACCCTGAAAATATTAAGTCCAAGAAACCAAAAGGGATGAGTAAACTTGCTGTGATTGTAATCGTAGTTAGCGATGTAATTGGTATTTGCCTAATAGGCTTGTTACTCTCACACTGTTTTTGCTCAAGCTTGATATGTTCTTATTATAACAAGAGTACGGATGGAAAGGGTGGGAAGAGATCAGGAAAGGAGAGTCTTTTATGCTTTAGGAAAGATGATTCAGAAAGTACTCTTTCAGAAAATGGGGACGAGCAATGTGATCTTGTGGCTTTAGATGCACAAGTGGGATTTAATCTTGATGAGCTTCTTAAAGCATCTGCCTTTGTTCTTGGTAAGAGTGGAATTGGGATTGTTTATAGAGTTGTGCTTGAAGATGGATCAACGTTAGCTGTTAGAAGATTAGGTGAAGGGGGTTCTCAAAGGTTAAAGGAATTTCAAACCGAAGTCGAAGCAATTGGAAAGCTACGGCACCCTAATTTAGTAACACTTAAAGCTTACTATTGGTCTGTTGATGAAAAACTGCTCATCTATGATTACATTCCTAATGGAAATCTTGCTCTTGCAATTCATGGGAAGGTTGGAACCACATCAAGTACTCCATTATCTTGGTCTGATAGGCTGAAGATAATGAAAGGAATAGCAAAAGGGTTGGTCTATTTGCATGAATTTAGTCCTAAAAAGTATGTGCATGGAGATTTGAAGCCTAACAATATACTACTTGGAGAGAACATGGAGGCCTACATCTCTGATTTCGGGCTGGGCAGGCTTGCGAAAATTGCTGGAGGGGCCCCACCCATTCAATCTAACCGTACGGAAGCAAACGAAGCCGAGATTTTACAAGAAAAGCAGCAAAAGTACGGAATAGGGCCTAATTCAGAATCTTGTTATCAGGCGCCGGAGTCATTGAAAGTGGTGAAACCATCTCAGAAATGGGATGTTTATTCATTTGGTGTTATTTTGTTAGAAATGATTAGTGGAAGGTCGCCTGTGATTCAAGTGGGCACTAGGGAAATGGAGCTTGTTCATTGGATTCAGTTATGTATTGATGAAGAGAGGCTGATTTCAGACGTTTTGGATCCGGGTTTGGCTCAAAATGGGGAGAATGAAGAGGAGGAGATGATTGCTGTTTTGAAGATTTCAATGGCTTGTGTCCATAGTAGCCCTGAAAAAAGGCCAACAATGAAGCATGTTTCTGATATTCTGGAAAGGATGGGAACATAG 2124 40.11 MLLILLLLLNVFYSNTIVTSLNEEASALLSFKNSIKEDPGGSLINWNSSDQTPCSWNGITCNDKRVISLSLPKSNLHGFLPSSLGSLTQLRHINLRNNRFNGTLPNELVQVQGLQSLVVFGNFLSGSLPNDIGKLKYLQILDLSQNFFNGSLPISIVQCKRLKSLSLSRNNFYGVLPDGFGTNLTRLEKLDLSFNRFSGFIPYDLSNLSSLEGTADLSHNLFSGSIPASLGNLPEKVYIDLTYNNLTGPIPQNGALINRGPTAFLGNSGLCGPPLKNPCSLQIPNHTSPSSSSSSFLPHRNHPENIKSKKPKGMSKLAVIVIVVSDVIGICLIGLLLSHCFCSSLICSYYNKSTDGKGGKRSGKESLLCFRKDDSESTLSENGDEQCDLVALDAQVGFNLDELLKASAFVLGKSGIGIVYRVVLEDGSTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNLVTLKAYYWSVDEKLLIYDYIPNGNLALAIHGKVGTTSSTPLSWSDRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPNNILLGENMEAYISDFGLGRLAKIAGGAPPIQSNRTEANEAEILQEKQQKYGIGPNSESCYQAPESLKVVKPSQKWDVYSFGVILLEMISGRSPVIQVGTREMELVHWIQLCIDEERLISDVLDPGLAQNGENEEEEMIAVLKISMACVHSSPEKRPTMKHVSDILERMGT 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2063811 2066364 - Conep06aG0043500.1 Cone6ag0425 439309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0425 707 PANTHER OS05G0588300 PROTEIN 155 705 IPR050994 -
Cone6ag0425 707 MobiDBLite consensus disorder prediction 282 301 - -
Cone6ag0425 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 21 182 - -
Cone6ag0425 707 SMART serkin_6 410 705 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0425 707 Gene3D Ribonuclease Inhibitor 74 285 IPR032675 -
Cone6ag0425 707 FunFam Leucine-rich repeat receptor-like protein kinase 388 480 - -
Cone6ag0425 707 Pfam Leucine rich repeat N-terminal domain 21 62 IPR013210 -
Cone6ag0425 707 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Cone6ag0425 707 Gene3D Phosphorylase Kinase; domain 1 375 480 - -
Cone6ag0425 707 ProSiteProfiles Protein kinase domain profile. 405 705 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0425 707 Pfam Protein tyrosine and serine/threonine kinase 411 700 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0425 707 MobiDBLite consensus disorder prediction 282 310 - -
Cone6ag0425 707 SUPERFAMILY Protein kinase-like (PK-like) 410 702 IPR011009 -
Cone6ag0425 707 Gene3D Ribonuclease Inhibitor 13 73 IPR032675 -
Cone6ag0425 707 Pfam Leucine rich repeat 161 212 IPR001611 GO:0005515(InterPro)
Cone6ag0425 707 CDD STKc_IRAK 411 705 - -
Cone6ag0425 707 Gene3D Transferase(Phosphotransferase) domain 1 481 707 - -
Cone6ag0425 707 Pfam Leucine Rich Repeat 216 233 IPR001611 GO:0005515(InterPro)
Cone6ag0425 707 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515(InterPro)
Cone6ag0425 707 Pfam Leucine Rich Repeat 89 108 IPR001611 GO:0005515(InterPro)
Cone6ag0425 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0425 707 SUPERFAMILY L domain-like 22 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1118 Cone-Chr19:8033697 Cone6ag0425 Cone-Chr6:2063811 3.73E-118 dispersed
Cone2ag0444 Cone-Chr2:2392127 Cone6ag0425 Cone-Chr6:2063811 8.32E-87 dispersed
Cone3ag0078 Cone-Chr3:451120 Cone6ag0425 Cone-Chr6:2063811 3.16E-64 dispersed
Cone6ag0425 Cone-Chr6:2063811 Cone6ag1421 Cone-Chr6:11390191 3.49E-92 dispersed
Cone13ag0803 Cone-Chr13:7406610 Cone6ag0425 Cone-Chr6:2063811 1.20E-237 wgd
Cone16ag0554 Cone-Chr16:7466643 Cone6ag0425 Cone-Chr6:2063811 3.83E-134 wgd
Cone19ag0808 Cone-Chr19:6465061 Cone6ag0425 Cone-Chr6:2063811 1.25E-237 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82916 PF12579 DUF3755 1.10E-16 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0425 - - - 0.0