Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0428 ATGAACGAGGTTGAAATCCTAACACGTTTGCGCCACACAAATCTAGTTTCTCTTTATGGTTGTACATCTCTTAAAAGCCAAGAACTCCTCCTCGTCTATGAATTCATTCCCAATGGAACCCTAGCCGATCATCTTCATGGTGATCTAGCAAACCCTTCTAGCTCACTCACATGGCCTCTACGTATGCAAATCGCCATCGAAACTGCAAGTGCCCTAGCTTATCTCCATGCATCCGATATCATCCACCGAGATGTGAAGACTAACAACATTCTTCTTGACCATAATTTTAGTGTCAAAGTTGCTGATTTTGGGCTTTCTCGGCTTTTTCCGAATGATGCCACCCACGTCTCCACGGCTCCTCAGGGGACTCCTGGTTACGTTGACCCAGAATACCATCAGTGTTATCAGCTTACTTGTAAGAGCGATGTTTACAGTTTTGGAGTGGTACTTATGGAGCTCATATCATCAATGCCAGCAGTTGATATATCTAGGGACAAGCATGAGATAAATTTGTCAAATTTAGCGATAAGCAAAATTCGAAAACGCGCATTTGATGAGTTTGTTGATAAATCTCTTGGATTTGAGTCGGATAGTGAAGTTAGAAGGATGACAATTGCAGTGGCGGAGTTAGGGCTTCAGTGTTTGCATTTGGAGATTGAATCTAGACCTCCCATGGATGAAGTCTTAAAGGATTTGAAGGGAATTCAAAGGGGTGAAGTTGAACCAGAGAATGAAGGAGTTAATGATTTGAGGCGAACGCATTCACCAGAATGCGATGAGGTCGGGTCTTTAAAGAATACGAAAATGCCGTCTTCACCTATTTCTGTAACTGATAAATGGCCGAGTATTTCAACTCCATCTAGTAGAAGTGTTGAAGTTCCCTGA 885 42.49 MNEVEILTRLRHTNLVSLYGCTSLKSQELLLVYEFIPNGTLADHLHGDLANPSSSLTWPLRMQIAIETASALAYLHASDIIHRDVKTNNILLDHNFSVKVADFGLSRLFPNDATHVSTAPQGTPGYVDPEYHQCYQLTCKSDVYSFGVVLMELISSMPAVDISRDKHEINLSNLAISKIRKRAFDEFVDKSLGFESDSEVRRMTIAVAELGLQCLHLEIESRPPMDEVLKDLKGIQRGEVEPENEGVNDLRRTHSPECDEVGSLKNTKMPSSPISVTDKWPSISTPSSRSVEVP 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2080564 2082144 + Conep06aG0043800.1 Cone6ag0428 439312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0428 294 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 284 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cone6ag0428 294 FunFam Wall-associated receptor kinase-like 20 36 245 - -
Cone6ag0428 294 SUPERFAMILY Protein kinase-like (PK-like) 1 241 IPR011009 -
Cone6ag0428 294 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0428 294 MobiDBLite consensus disorder prediction 233 261 - -
Cone6ag0428 294 SMART serkin_6 1 233 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0428 294 MobiDBLite consensus disorder prediction 233 294 - -
Cone6ag0428 294 Gene3D Transferase(Phosphotransferase) domain 1 40 245 - -
Cone6ag0428 294 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
Cone6ag0428 294 Pfam Protein tyrosine and serine/threonine kinase 1 232 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0428 294 PIRSF ILK 1 242 - -
Cone6ag0428 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0428 294 MobiDBLite consensus disorder prediction 265 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0439 Cone-Chr2:2358824 Cone6ag0428 Cone-Chr6:2080564 5.49E-98 dispersed
Cone6ag0428 Cone-Chr6:2080564 Cone7ag1788 Cone-Chr7:11731708 3.05E-67 dispersed
Cone11ag0305 Cone-Chr11:1489818 Cone6ag0428 Cone-Chr6:2080564 3.90E-111 wgd
Cone12ag1168 Cone-Chr12:9274822 Cone6ag0428 Cone-Chr6:2080564 2.29E-50 wgd
Cone13ag0807 Cone-Chr13:7428880 Cone6ag0428 Cone-Chr6:2080564 6.47E-111 wgd
Cone13ag0309 Cone-Chr13:2440299 Cone6ag0428 Cone-Chr6:2080564 2.64E-106 wgd
Cone16ag0560 Cone-Chr16:7508271 Cone6ag0428 Cone-Chr6:2080564 4.52E-99 wgd
Cone18ag1190 Cone-Chr18:8501767 Cone6ag0428 Cone-Chr6:2080564 2.13E-108 wgd
Cone19ag0814 Cone-Chr19:6491436 Cone6ag0428 Cone-Chr6:2080564 7.45E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82917 PF13899 Thioredoxin_7 7.80E-13 CL0172 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0428 - - - 0.0