Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0430 ATGGTGGAGAGAGATTCCAATTCGAGTAGTGGCGGCCAACCTTCTCGTAATAATGGCTGTGCCGGAGCTCCAAATTTCGTAGATACTATCTGTCACGCCGGTGCTGGTGCTTCCGCAGGTTCTATTGCTGCTACGTTTGTTTGTCCGTTGGATGTGATCAAGACGAGGCTGCAAGTGCATGGCCTTCCTTCTGGTCATAAAGGTAGTGTCATTATCACAAGCTTACAGGATATAATACGTACTGAAGGTTTGAGGGGGCTCTATCGTGGGCTTTCGCCAACACTAGTAGCGCTTCTTCCAAACTGGGCTGTGTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTCCATTCAGATGGGGATCGTGAAGGGAAGCTCTCGATTGGTAAACATATGGTTGCTGCCGCAGGTGCAGGGGCTTCCACTTCTATTGTTACAAATCCATTATGGGTTGTTAAGACCAGACTTCAAACACAGGGAATGAGGCCTGGTGTGATTCCTTACTCAGGAATGCTTTCAGCCTTCACAAGGATTATACACGAAGAAGGAATACGAGGCCTTTACAGTGGCATAATCCCTTCACTGGCCGGAATAAGTCATGTTGCTATTCAGTTCCCAGCATATGAATGGCTCAAGGCTTATATGGCAAAAAGAGATAATACAACCGTTAATAAGCTAAGTCCTGGCAGAGTAGCTATTGCTTCCTCCCTCTCTAAAATAATCGCATCTATAATGACTTACCCCCACGAGGTGATTCGTTCTAGACTTCAAGAACAAGGACAGGCTAGGAATATTGGAGTTCAATATATGGGTGTTGTAGATTGTGTTAAGAAAGTGTTCCACAAAGAAGGCTTTGCGGGTTTCTACAGGGGCTGTGCAACAAATCTAATGCGGACAACTCCTTCTGCTGTAATAACTTTTACCAGTTACGAGATGATATATAGGTATATGCAAAAGGTTCTTCCTCCAGACAAGAACCATTCACAATCCTCCCAACCTAGATCTAGCGGCCATGTCAAACCGGAACAAGAAAATGGAGGCAGTTTAAGTAAGAATAATGGTTCTGATTTACAGCAACCACAATCCCAGTCAAATAAGAGCACCCAAGTTCCTTTGGGAAGCAAAGACCACCTGGCTGCAAGACACTGA 1149 44.91 MVERDSNSSSGGQPSRNNGCAGAPNFVDTICHAGAGASAGSIAATFVCPLDVIKTRLQVHGLPSGHKGSVIITSLQDIIRTEGLRGLYRGLSPTLVALLPNWAVYFTVYEHLKGLLHSDGDREGKLSIGKHMVAAAGAGASTSIVTNPLWVVKTRLQTQGMRPGVIPYSGMLSAFTRIIHEEGIRGLYSGIIPSLAGISHVAIQFPAYEWLKAYMAKRDNTTVNKLSPGRVAIASSLSKIIASIMTYPHEVIRSRLQEQGQARNIGVQYMGVVDCVKKVFHKEGFAGFYRGCATNLMRTTPSAVITFTSYEMIYRYMQKVLPPDKNHSQSSQPRSSGHVKPEQENGGSLSKNNGSDLQQPQSQSNKSTQVPLGSKDHLAARH 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2086342 2089999 - Conep06aG0044000.1 Cone6ag0430 439314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0430 382 SUPERFAMILY Mitochondrial carrier 25 312 IPR023395 -
Cone6ag0430 382 MobiDBLite consensus disorder prediction 322 382 - -
Cone6ag0430 382 Gene3D Mitochondrial carrier domain 120 328 IPR023395 -
Cone6ag0430 382 Gene3D Mitochondrial carrier domain 16 119 IPR023395 -
Cone6ag0430 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Cone6ag0430 382 Pfam Mitochondrial carrier protein 125 217 IPR018108 -
Cone6ag0430 382 Pfam Mitochondrial carrier protein 226 319 IPR018108 -
Cone6ag0430 382 Pfam Mitochondrial carrier protein 30 118 IPR018108 -
Cone6ag0430 382 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085(InterPro)
Cone6ag0430 382 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085(InterPro)
Cone6ag0430 382 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085(InterPro)
Cone6ag0430 382 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085(InterPro)
Cone6ag0430 382 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085(InterPro)
Cone6ag0430 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 316 IPR018108 -
Cone6ag0430 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 115 IPR018108 -
Cone6ag0430 382 MobiDBLite consensus disorder prediction 323 372 - -
Cone6ag0430 382 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 28 317 - -
Cone6ag0430 382 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 28 329 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1180 Cone-Chr11:8963037 Cone6ag0430 Cone-Chr6:2086342 3.87E-33 dispersed
Cone17ag0445 Cone-Chr17:2088496 Cone6ag0430 Cone-Chr6:2086342 5.41E-139 dispersed
Cone20ag0967 Cone-Chr20:6902718 Cone6ag0430 Cone-Chr6:2086342 1.19E-142 dispersed
Cone20ag1234 Cone-Chr20:8171942 Cone6ag0430 Cone-Chr6:2086342 7.41E-19 dispersed
Cone3ag1201 Cone-Chr3:30709835 Cone6ag0430 Cone-Chr6:2086342 4.08E-29 dispersed
Cone6ag0430 Cone-Chr6:2086342 Cone8ag0303 Cone-Chr8:1751422 1.87E-13 dispersed
Cone12ag0781 Cone-Chr12:7136414 Cone6ag0430 Cone-Chr6:2086342 6.26E-57 transposed
Cone11ag0356 Cone-Chr11:1743377 Cone6ag0430 Cone-Chr6:2086342 3.67E-13 wgd
Cone18ag1144 Cone-Chr18:8246994 Cone6ag0430 Cone-Chr6:2086342 1.20E-12 wgd
Cone6ag0430 Cone-Chr6:2086342 Cone9ag0448 Cone-Chr9:2078838 3.15E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0430 K15115 - csv:101216902 520.776