Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0484 ATGGATGGAGGTAAGAGAAAGTTGCGGTTGAGCAAGATATATTCCTTCACATGTGGGAAAGCATCTTTGAAGGATGATGATCGTTCACACATTGGGGAGTTGGGATTTTCCCGTGTGGTTTACTGCAACGAACCAGGAAGTTTTGAGGCCGGGGTACAAAATTACAGAGATAATTACGTTCGGACTACAAAGTATACAGTTGCTACTTTCTTGCCCAAGTCTTTGTTTGAGCAGTTTAGGAGAGTGGCTAATTTTTACTTCTTAGTTATTGGTATCTTGGCTTTTACTCCTCTTGCTCCTTATACGGCAGTCAGTGCTATAATCCCTCTGATCGTTGTTGTTTCTGCTACGATGATCAAAGAAGGTATTGAAGATCTGCAGAGAAAGAAGCAGGATAATGAGATGAACAATAGAAAGGTTAAAGTCCATCAAGGTAATGGAGTTTTTGATTATACTGAGTGGAGGCATCTGAGGGTAGGAGATATAGTGAAGGTAGAGAAGGATGCATTCTTTCCAACAGACCTTCTCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACAATGAATCTTGACGGGGAGACAAATTTGAAATTAAAACAAGCACTGGATGTAACTGCATCTGCAGATGAGGACTCTAAATTCTGCGATTTTAAGGCTGTGGTTAAATGTGAAGATCCCAATGCTAATTTGTACTCTTTTGTGGGAAGTATGATGTTTGAAGAACGGCAGTATCCACTTTCTCCACAACAGCTCCTCCTGAGAGATTCTAAACTCCGGAATACAGAATATATATACGGGACGGTTGTCTTTACTGGTTATGACACAAAGGTTGTCCAAAATTCTACAGACCCCCCTTCCAAGAGAAGCAAAGTCGAGAAGAGGATGGATAAGATTATCTATTTTCTGTTCTGTGTTCTTTTTATTCTGGCACTTATTGGATCCATATTCTTTGGAATAGCAACTAAGGAAGATCTGAAAAATGGGACTATGAAGAGATGGTATCTTAGACCAGATAGTTCCAAGGTTTTCTTTGACCCAAAAAAAGCCCCAGCTGCAGCAATTTTTCACTTCCTGACAGTGCTGATGTTGTATAATTACTTCATTCCAATATCTTTGTATATATCGATTGAGATTGTCAAAGTTCTGCAGAGCATTTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCCGACAAACCAGCACATGCCCGCACCTCGAATTTAAATGAGGAACTTGGCCAAGTTGACACAATTCTTTCCGATAAAACTGGGACTTTAACCTGCAATTCAATGGAATTCATCAAGTGTTCTGTGGCCGGAATAGCTTATGGCCGTGGTTTAACAGAAGTTGATAGGGCTTTGAGTAAGAAGAAAGACTCATCAGAGGATGAGAGTGTTAAGGGAGAGAATCGCAATGAGGATTCTGCAGATACAAAGCCACCCATCAAAGGCTTTAACTTTGAGGATGAAAGAATAGTGAATGGGAACTGGGTAAATGAGCCCCATGCAGATGTCATCAAAAAGTTTTTTCATCTTCTTGGAACTTGTCATACAGCCATACCAGAAGTTGATGCAGACACAGGGAAGGTTTCATATGAAGCTGAATCACCAGATGAAGCAGCTTTTGTAATTGCAGCCAGAGAACTTGGCTTCGAATTCTACAAGAGGACACAAACAAGCATATCATTGCGTGAATCAGATCCAGTGTCTGGCCAGAAAATTGAAAGGTTATATCAACTGTTGAATGTTCTAGAGTTTAATAGCTCCAGGAAACGGATGTCTGTCATTGTAAGAAATGAGTACGGGAAAATATTGTTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGGCGAGAATGGCAAAGAGTTTGAAGAGCAGACCAGAGGCCATGTAAATGAGTATGCTGATGCAGGGCTGAGGACCTTGATACTTGCCTATCGTGAACTTGATGAGGAAGAGTATGAAGAATTTGAGAGGAACTTCAGCCAGGCAAGGAATTCAGTTAGTGCTAACCGTGAATCATTGATTGATAAAGTTTCAGATAAGATTGAAAGGGATCTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTCCAAGCTGGGGTTCCTGAGTGCATTAACAAGCTAGCTCAAGCAAGAATTAAGATTTGGGTTTTGACTGGGGACAAAATGGAAACCGCCATCAATATTGGCTCTGCCTGTAGATTACTTAGACAAGGAATGAAGCAGATTATTATAACGTTGGAGAGTCCTGAAATTCAGGCTTTGGAAAAGACCGGAGAAAAGACTGGCATCCCCAAGGCACTAAAAGAAAATGTCCTTAATCAAATAACTCGTGGGAGTGCTCAGGTTAGTTCATCAACCAGGAGTAATGAGGCGTTTGCTTTAATTATTGATGGAAAATCACTTGCATATGCTCTAGAAGATGATATTAAGGAAATGTTTCTAGAGCTTGCAATTGGTTGTGCATCTGTTATTTGCTGTCGTTCATCTCCAAAGCAGAAAGCACTGGTTACTAGACTTGTTAAATCTGGAACTGGAAAGACAACATTGGCAATTGGAGATGGTGCTAATGATGTGGGCATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGCGGTGCTGAAGGAATGCAGGCCGTCATGTCAAGTGATATTGCAATTGCACAGTTCAGATACTTGGAACGTCTGGTACTTGTGCATGGACATTGGTGTTATAGAAGAATATCATCAATGATTTGCTACTTTTTCTATAAAAATGTTACTTTCGGTTTCACCATTTTCTTATACGAAGCCCATGCATCCTTCTCTGGACAACCTGCATACAATGATTGGTTTCTGTCTCTTTATAACGTTCTCTTCTCTTCTCTGCCCGTGGTGGGTCTAGGAGTTTTTGACCAGGACGTCTCTGCAAGATTTTGTCTCAAGTTTCCTCTATTACACCAACAAGGCGTCCAAAATGTCCTCTTCAGCTGGCGCAGAATACTTAGCTGGATGTTTAACGGGTTATGTAGCGCCCTAATCATTTTCTATCTCTGCACAAAAGCATTAGAGCATCAAGCGTTTAATTCTAACGGAAAAACCATTGGAAGAGATATCTTAGGAACAACTATGTACTCTTGCGTAGTATGGGTCGTAAACTTGCAGATGGCTCTCTCTATTACTTACTTCACCTTGATACAACATCTCTTTATCTGGGGCTCCATTTCTCTCTGGTACATTTTCCTTCTCATTTATGGATCCATGTATCCGGACTTTTCGAAATCAGCTTTCCGGATCTTCGTAGAAGTCCTTGCCCCAGCCCCACTTTACTGGTTTGTCTTGCTGTTTGTGGTCACCTCGACCCTTATTCCGTATTTTTCTTACTCTGCTATTCAGATGAGATTCTTTCCAATGTACCATGAAATGATTCAGTGGGTAAGGCATAAGGGACTGTCTCAAGATCCCCTGCAGTTTAGGGATACAGTGCAACCGCCGGCTGTAGGTTCCGCAGCCAGATTAGCAAGTAGACTTAGAAGAGAAAAGTCATAG 3558 41.12 MDGGKRKLRLSKIYSFTCGKASLKDDDRSHIGELGFSRVVYCNEPGSFEAGVQNYRDNYVRTTKYTVATFLPKSLFEQFRRVANFYFLVIGILAFTPLAPYTAVSAIIPLIVVVSATMIKEGIEDLQRKKQDNEMNNRKVKVHQGNGVFDYTEWRHLRVGDIVKVEKDAFFPTDLLLLSSSYEDAICYVETMNLDGETNLKLKQALDVTASADEDSKFCDFKAVVKCEDPNANLYSFVGSMMFEERQYPLSPQQLLLRDSKLRNTEYIYGTVVFTGYDTKVVQNSTDPPSKRSKVEKRMDKIIYFLFCVLFILALIGSIFFGIATKEDLKNGTMKRWYLRPDSSKVFFDPKKAPAAAIFHFLTVLMLYNYFIPISLYISIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGIAYGRGLTEVDRALSKKKDSSEDESVKGENRNEDSADTKPPIKGFNFEDERIVNGNWVNEPHADVIKKFFHLLGTCHTAIPEVDADTGKVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLRESDPVSGQKIERLYQLLNVLEFNSSRKRMSVIVRNEYGKILLLCKGADSVMFERLGENGKEFEEQTRGHVNEYADAGLRTLILAYRELDEEEYEEFERNFSQARNSVSANRESLIDKVSDKIERDLILLGATAVEDKLQAGVPECINKLAQARIKIWVLTGDKMETAINIGSACRLLRQGMKQIIITLESPEIQALEKTGEKTGIPKALKENVLNQITRGSAQVSSSTRSNEAFALIIDGKSLAYALEDDIKEMFLELAIGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFRYLERLVLVHGHWCYRRISSMICYFFYKNVTFGFTIFLYEAHASFSGQPAYNDWFLSLYNVLFSSLPVVGLGVFDQDVSARFCLKFPLLHQQGVQNVLFSWRRILSWMFNGLCSALIIFYLCTKALEHQAFNSNGKTIGRDILGTTMYSCVVWVVNLQMALSITYFTLIQHLFIWGSISLWYIFLLIYGSMYPDFSKSAFRIFVEVLAPAPLYWFVLLFVVTSTLIPYFSYSAIQMRFFPMYHEMIQWVRHKGLSQDPLQFRDTVQPPAVGSAARLASRLRREKS 1185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2412016 2417901 + Conep06aG0049400.1 Cone6ag0484 439368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0484 1185 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1144 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone6ag0484 1185 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 666 IPR023299 GO:0000166(InterPro)
Cone6ag0484 1185 Gene3D - 694 902 IPR023214 -
Cone6ag0484 1185 NCBIfam HAD-IC family P-type ATPase 828 941 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone6ag0484 1185 SFLD C1.7: P-type atpase like 406 913 - -
Cone6ag0484 1185 FunFam Phospholipid-transporting ATPase 698 902 - -
Cone6ag0484 1185 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cone6ag0484 1185 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Cone6ag0484 1185 SFLD p-type atpase 406 913 IPR044492 -
Cone6ag0484 1185 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Cone6ag0484 1185 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cone6ag0484 1185 FunFam Phospholipid-transporting ATPase 116 286 - -
Cone6ag0484 1185 Pfam Cation transport ATPase (P-type) 521 624 - -
Cone6ag0484 1185 SUPERFAMILY HAD-like 419 917 IPR036412 -
Cone6ag0484 1185 Gene3D - 559 672 IPR023299 GO:0000166(InterPro)
Cone6ag0484 1185 Coils Coil 655 675 - -
Cone6ag0484 1185 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Cone6ag0484 1185 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Cone6ag0484 1185 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone6ag0484 1185 FunFam Phospholipid-transporting ATPase 540 698 - -
Cone6ag0484 1185 MobiDBLite consensus disorder prediction 459 488 - -
Cone6ag0484 1185 Gene3D - 115 286 - -
Cone6ag0484 1185 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1140 IPR023298 -
Cone6ag0484 1185 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0125 Cone-Chr2:600969 Cone6ag0484 Cone-Chr6:2412016 5.24E-225 dispersed
Cone2ag0126 Cone-Chr2:609080 Cone6ag0484 Cone-Chr6:2412016 1.54E-128 dispersed
Cone2ag0127 Cone-Chr2:611123 Cone6ag0484 Cone-Chr6:2412016 4.30E-301 dispersed
Cone2ag0731 Cone-Chr2:32974664 Cone6ag0484 Cone-Chr6:2412016 0 dispersed
Cone4ag0921 Cone-Chr4:7517226 Cone6ag0484 Cone-Chr6:2412016 5.56E-264 dispersed
Cone4ag0922 Cone-Chr4:7520532 Cone6ag0484 Cone-Chr6:2412016 9.03E-172 dispersed
Cone6ag0484 Cone-Chr6:2412016 Cone7ag1229 Cone-Chr7:9118286 0 dispersed
Cone13ag0871 Cone-Chr13:7765056 Cone6ag0484 Cone-Chr6:2412016 0 wgd
Cone19ag0872 Cone-Chr19:6833295 Cone6ag0484 Cone-Chr6:2412016 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0484 K01530 - csv:101207148 1848.94