Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0487 ATGGCAACCATATCACCATCAGCAAGTTCACCACCTTCTGATTCTTCTTCAGAGCCACCATCACCACCACCACCAGAACCATCCAGCTCTGCTCCACCACCTTCGAATTCCGACCCACCACCAGCACCACCACTGTCAACCTCCACTCCACCACCACAACCTCCTTCAGACCCTCCAACAACTACTTCTCCACCTTCTCAGTCCAATACAGATCCACCTCCTCCCACCACCTCCACCCCATCAACCCCATCTTTACTGCCACCGCCACCTCCTCCTCCTCCTCCTTCCGCCATTCCACCACCATTGGTACCACCTACCATATCAACTCAACCTCCGTCTGATTCCGTCTCACCTTCTTCCCCTGCACCACCTTCTTCCACCACTCCCCCTCCTTCTTCTACCTCTAATCCTCCTCCACCACTCCCATCGAACCCGCCCAACACCTCACCACCACCACCATCAAATCCGCCCGAGATTTCACCACCACCTCCACCACAATCAAAGCCTCCGGAGAATTCACTACCACCAGTTTCTCCACAATCAAAGCCTCCCGAGAGTTCACCACCACCCCCACCACCACCTCCATCAAATCCGCCTGAGAGTTCACCTCAACCACCACCACAATCAAAGCCTCCCAAGACTTCACTGCCCCAACCACCACTATCTTCAGAACCTCCCGAAACTTCACCACCACCTCCTGATGCTAGAGCACCCAAGAATTCAACCCCACCACCCAAAAAACCACCTTCACCAATTCTATCAAACCCTCCAAAAAATTCACCTCCTCCACAAACAGCATCAGAACCTCCGAGCAGTAGTAATGCGCCTCCCCCTTCTAAGCTCACTCCCATTTCACCTTCAATCTCAACCTCAAAGACTTCTCCCCCACCACCTCCATTGTCCTCTCAATCAAACAATGGGATGACAAATGCACCCGAAACTTCAAACCCCACATCTAATAGTACTAATGGGGGAGGAGGTTTTGGTCTTGGAGGCATAGTTGCTATGGCTATCGTGTCTGGAATGATACTGCTCGGCCTTTTTGGACTGGCCGCTTGGTGTTTTAGAAAGCAAAAGAAAAAGCCCGGAGTTGGCATTTACGTAATGCCATCCCCTCTTGGCTCGTCACCTAGATCAGATTCATACCTCATAAAGGTGAATTCCTCAGCCCCACTAGGAAGCGAATCTGGCTGCGAATTTTCAGTTTCTCCCCCTGATCCTTCTTCATTAGGTCATTCAAGGTCGTTGTTTACATATGAAGAACTAGCTAAGGCAACAGACGGGTTTTTGGCTCGAAATCTATTAGGTGAAGGCGGGTTTGGTTCGGTATATAAAGGATTTCTACCTGATGAGAGAGAAGTGGCAGTGAAGGAACTAAAAATCGGAGGAGGTCAGGGTGAGAGAGAATTCAAAGCCGAAGTTGAGACTATTAGCCGGGTACATCATCGCCATTTGGTTTCATTAGTTGGTTATTGTATATCGGAGAATAGGAGGCTTCTTGTCTATGACTATGTCCCCAACAATAATCTTTATTACCATATTCACGAGGAGGGTAAGCCGGCTCTTGATTGGCAAAAACGGGTAAAAATTGCCACTGGTGCTGCTCGGGGCATAGCATATCTACATGAAGACTGCAATCCTCAAATTATTCACAGGGATATCAAATCATCAAACATTCTGTTGAACTACAATCTTGAAGCTCTGGTTTCAGATTTTGGGCTTGCAAAATTAGCTCTGGATTCTAATACACATATAACTACACGGGTTATGGGTACTTTTGGATATGTGGCTCCTGAGTATGCTTCAAGTGGGAAATTGACCGAGAAATCAGATGTCTACTCTTTTGGAGTTGTCCTTTTGGAGCTAATTACCGGACGGAAGCCAGTAGATACATCTCAGCCTGTAGGAGATGAAAGTCTTGTTGAATGGGCTCGACCATTGCTTAGTCATGCACTTGAAACCGAGCAATTTGAAGAATTGGCAGATCCGAGACTCGAGAGAAACTATGACAAGACGGAAATGTTCAAAATGATAGAGATTGCTGCTTCTTGTGTGAGGCATTCAGCAGCTAAGAGGCCCCGAATGGGACAGGTTGTTAGAGCTTTTGACTGTTTAGATACGTTGGATCTAACAAACAAATTGGCAGTCGGGGAAAGTAAGACCTTCGATACAGCAGAGCAATCTGCTGAGATCAGGCTTTTCCAGAGAATGGCTTTCGGTAGCCAACCTTATAGTACAGATTTCTTTAGCCAGGATTACAGTACAGCTTAA 2271 47.56 MATISPSASSPPSDSSSEPPSPPPPEPSSSAPPPSNSDPPPAPPLSTSTPPPQPPSDPPTTTSPPSQSNTDPPPPTTSTPSTPSLLPPPPPPPPPSAIPPPLVPPTISTQPPSDSVSPSSPAPPSSTTPPPSSTSNPPPPLPSNPPNTSPPPPSNPPEISPPPPPQSKPPENSLPPVSPQSKPPESSPPPPPPPPSNPPESSPQPPPQSKPPKTSLPQPPLSSEPPETSPPPPDARAPKNSTPPPKKPPSPILSNPPKNSPPPQTASEPPSSSNAPPPSKLTPISPSISTSKTSPPPPPLSSQSNNGMTNAPETSNPTSNSTNGGGGFGLGGIVAMAIVSGMILLGLFGLAAWCFRKQKKKPGVGIYVMPSPLGSSPRSDSYLIKVNSSAPLGSESGCEFSVSPPDPSSLGHSRSLFTYEELAKATDGFLARNLLGEGGFGSVYKGFLPDEREVAVKELKIGGGQGEREFKAEVETISRVHHRHLVSLVGYCISENRRLLVYDYVPNNNLYYHIHEEGKPALDWQKRVKIATGAARGIAYLHEDCNPQIIHRDIKSSNILLNYNLEALVSDFGLAKLALDSNTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPVGDESLVEWARPLLSHALETEQFEELADPRLERNYDKTEMFKMIEIAASCVRHSAAKRPRMGQVVRAFDCLDTLDLTNKLAVGESKTFDTAEQSAEIRLFQRMAFGSQPYSTDFFSQDYSTA 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2421458 2425005 - Conep06aG0049700.1 Cone6ag0487 439371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0487 756 MobiDBLite consensus disorder prediction 303 323 - -
Cone6ag0487 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0487 756 ProSiteProfiles Protein kinase domain profile. 429 708 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0487 756 SUPERFAMILY Protein kinase-like (PK-like) 405 701 IPR011009 -
Cone6ag0487 756 MobiDBLite consensus disorder prediction 116 283 - -
Cone6ag0487 756 FunFam Proline-rich receptor-like protein kinase PERK8 401 504 - -
Cone6ag0487 756 Pfam Protein tyrosine and serine/threonine kinase 433 701 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag0487 756 ProSitePatterns Protein kinases ATP-binding region signature. 435 457 IPR017441 GO:0005524(InterPro)
Cone6ag0487 756 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 295 737 IPR047117 -
Cone6ag0487 756 Gene3D Transferase(Phosphotransferase) domain 1 505 720 - -
Cone6ag0487 756 FunFam proline-rich receptor-like protein kinase PERK8 505 716 - -
Cone6ag0487 756 MobiDBLite consensus disorder prediction 13 108 - -
Cone6ag0487 756 Gene3D Phosphorylase Kinase; domain 1 405 504 - -
Cone6ag0487 756 CDD STKc_IRAK 435 700 - -
Cone6ag0487 756 SMART serkin_6 429 705 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag0487 756 MobiDBLite consensus disorder prediction 1 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0487 Cone-Chr6:2421458 Cone8ag0663 Cone-Chr8:6652064 9.39E-150 dispersed
Cone6ag0487 Cone-Chr6:2421458 Cone6ag0493 Cone-Chr6:2454752 7.29E-74 proximal
Cone13ag0873 Cone-Chr13:7771553 Cone6ag0487 Cone-Chr6:2421458 1.85E-208 wgd
Cone6ag0487 Cone-Chr6:2421458 Cone9ag0499 Cone-Chr9:2387964 1.42E-290 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82919 PF00641 zf-RanBP 1.80E-08 CL0167 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0487 - - - 0.0