Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0495 ATGGAGCTCCCCCTTCATTTTGCAACTCTCATTTCAATCATAGTACTAATCTTCATTATTGTTATTAATCTGTCCACCATAGGCTGTACTGACCCTCCTCTTACCTTGGATTACTATGCCTCTACTTGCCCTTCTCTCTTTCAAACTATCCGAAAAGAAATGGAATGTGCTGTTCTGTCTGACCCACGGAATGCCGCCCTCATCGTTCGATTACACTTCCACGACTGCTTCGTTCAGGGATGTGATGGGTCGGTTTTGCTAGATGACACAATAACGCTGCAAGGGGAGAAGAAGGCTTCTCCAAACATACACTCTCTAAAAGGGTTCAGTATCGTCGATAAGATTAAGAACATAGTTGAATCGGACTGCCCAGGAATCGTCTCTTGCGCGGATCTTCTTACCATTGCAGCAAGAGACGCTGTCATTCTTGTTGGTGGACCGTATTGGGAAGTTCCGTTGGGAAGAAAGGATGCAATAACTGCAGGTTATGAATTAGCCAACGGTAATATTCCCACTGCAGATGAAGGCCTTCTTAGTATCATCTCCAAGTTTCTTTATCAGGGGCTGTCGGTCACTGACATGGTTGCTCTCTCAGGGTCGCATACTATTGGTATGGCGCGGTGTAAGAGTGCGAGAACAAGGATCTATGGAGGTTTGGAAGCAACTTCAGCCATGAATCCAATTTCAGGGGCAGAGCTGATAAGCAAGTTGAAATCAACTTGCCCTCTAATCGGTGGAGATAATAACGTCACAGCCATGGACTATGTCACACCAAACCTGTTTGACAACTCTTACTATCATATTTTATTACAAGGGAACGGTTTGCTGATTTCAGACCAGGAATTGTATTCTAGTGTGTTGGCGTTTGAGACTAAAGAGTTGGTGAAGAAGTATGCGGCTGACCCACTTGCCTTCTTTGAGCAATTCTCTGAATCCATGATCAAGTTGGGGAATATTACAAATTCTGATAGCTTTGTGAATGGGGAAGTTAGGAAGAATTGCAGGTTTGTGAACACATGA 1020 44.12 MELPLHFATLISIIVLIFIIVINLSTIGCTDPPLTLDYYASTCPSLFQTIRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASPNIHSLKGFSIVDKIKNIVESDCPGIVSCADLLTIAARDAVILVGGPYWEVPLGRKDAITAGYELANGNIPTADEGLLSIISKFLYQGLSVTDMVALSGSHTIGMARCKSARTRIYGGLEATSAMNPISGAELISKLKSTCPLIGGDNNVTAMDYVTPNLFDNSYYHILLQGNGLLISDQELYSSVLAFETKELVKKYAADPLAFFEQFSESMIKLGNITNSDSFVNGEVRKNCRFVNT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2463893 2465192 - Conep06aG0050500.1 Cone6ag0495 439379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0495 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cone6ag0495 339 FunFam Peroxidase 171 316 - -
Cone6ag0495 339 CDD secretory_peroxidase 34 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone6ag0495 339 SUPERFAMILY Heme-dependent peroxidases 34 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 Gene3D Peroxidase, domain 2 171 316 - -
Cone6ag0495 339 Gene3D - 38 338 - -
Cone6ag0495 339 ProSiteProfiles Plant heme peroxidase family profile. 33 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 Pfam Peroxidase 50 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag0495 339 FunFam Peroxidase 37 177 - -
Cone6ag0495 339 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
Cone6ag0495 339 PANTHER PEROXIDASE 72-RELATED 15 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0495 Cone-Chr6:2463893 Cone6ag1651 Cone-Chr6:12612075 8.76E-87 dispersed
Cone6ag0495 Cone-Chr6:2463893 Cone9ag0507 Cone-Chr9:2423007 2.87E-223 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0495 K00430 - rcu:8264618 502.671