Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0514 ATGGATGTGAACTTGAGCTTTTCGAACACCATGGATGATGAATATGAGAAATTTGTCAGGAGAATGAACCCACCCAGAGTTGTAATTGACAATGAAGCCTGCAAGGATGCTACAGTGATAAGGGTAGACAGTGCTAACAAACATGGGATACTTCTTGAAGTTGTTCAAATCCTTACTGACCTTAATCTGATCATAACTAAAGCCTACATATCTTCAGATGGAAACTGGTTCATGGATGTTTTCAATGTCACTGATCAAGATGGAAACAAAATTACTGATGAAGAGCTTTTGGACTTCATTAGAAGGTCACTGGGACCGGAGTCTTGCTTCACCATGAGATCAATCGGGGTTAAACCATCCACCAACCATACTGCAATCGAGATGACCGGAACCGACCGTCCCGGACTACTATCCGAACTGAGTGCTATCCTGACCCATCTCAAATGCAATGTTGTAAGCGCCGAGATCTGGACCCACAACACTCGGGCCGCTGCTGTTATGAATGTAACAGATGAAGAAACGGGCCTTCCAATCAGTGACTCGGAGCGGCTCTCTAAGATCAAGGAATTGCTCTGCAATGTGCTCAAGGGAAGCAGCAATAATAATTGCTCTAGTGGAGCTAAGACCGTGGTTTCTCATGGCGGGACCCACACGGAGAGAAGGCTTCATCAGATGATGTTTGATGATAGAGATTACGAACGGGCGGCTGAGGACGACACCTTAGATGAGAACCGGAGACCCGAGGTCAATGTCGTAAATTGGCTCGACAAAGATTACTCTGTGGTTACTATCCGGAGCAAGGATAGGCCCAAGCTTTTATTCGATACGGTTTGTACCTTGACCGATATGCAATATATTGTGTTTCATGCAAATGTTAACGCAGAAGGGTCTCGAGCTTATCAGGAATATTACATCAGGCATGTAGATGGATCTCCAGTGAAATCAGAGCCAGAGAGGGAAAGAGTAATCCAATGTCTTCAAGCTGCTATTGAGAGAAGAGTGTCTGAGGGGTTGAAGCTTGAATTGTGCACTTCCGATAGGGTGGGGTTGCTATCGGACGTTACTCGGATATTCCGAGAGAACAGCCTAACAGTAACGAGAGCTGAGGTGGCGACTAAAGCAGGCAAGGCGAGAAACACATTCTATGTTCAGGATGCGTCGGGATATCCCGTAGATTCCAAGACCATAGATTCTATCAGGCAAGAGATTGGTCAAACCATACTGCAAGTGAGGGGCAGTTCTCAAGAGCCAAAACCTGATTCTCAAGATTCTACAACACGATTCCTCTTTGGAGGTCTCTTCAAGTCTAGATCCTTTGTTAACTTTGGCCAAATCAGGTCCTATTCTTGA 1350 45.41 MDVNLSFSNTMDDEYEKFVRRMNPPRVVIDNEACKDATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGNWFMDVFNVTDQDGNKITDEELLDFIRRSLGPESCFTMRSIGVKPSTNHTAIEMTGTDRPGLLSELSAILTHLKCNVVSAEIWTHNTRAAAVMNVTDEETGLPISDSERLSKIKELLCNVLKGSSNNNCSSGAKTVVSHGGTHTERRLHQMMFDDRDYERAAEDDTLDENRRPEVNVVNWLDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYIVFHANVNAEGSRAYQEYYIRHVDGSPVKSEPERERVIQCLQAAIERRVSEGLKLELCTSDRVGLLSDVTRIFRENSLTVTRAEVATKAGKARNTFYVQDASGYPVDSKTIDSIRQEIGQTILQVRGSSQEPKPDSQDSTTRFLFGGLFKSRSFVNFGQIRSYS 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2553284 2555846 + Conep06aG0052600.1 Cone6ag0514 439398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0514 449 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 14 411 IPR040217 -
Cone6ag0514 449 CDD ACT_ACR_4 337 408 - -
Cone6ag0514 449 SUPERFAMILY ACT-like 34 105 IPR045865 -
Cone6ag0514 449 Pfam ACT domain 125 172 IPR002912 -
Cone6ag0514 449 Pfam ACT domain 38 97 IPR002912 -
Cone6ag0514 449 SUPERFAMILY ACT-like 335 404 IPR045865 -
Cone6ag0514 449 ProSiteProfiles ACT domain profile. 339 415 IPR002912 -
Cone6ag0514 449 CDD ACT_ACR_2 124 197 - -
Cone6ag0514 449 ProSiteProfiles ACT domain profile. 39 122 IPR002912 -
Cone6ag0514 449 CDD ACT_ACR_1 37 107 - -
Cone6ag0514 449 CDD ACT_ACR_3 259 333 - -
Cone6ag0514 449 SUPERFAMILY ACT-like 120 194 IPR045865 -
Cone6ag0514 449 Gene3D - 122 196 - -
Cone6ag0514 449 ProSiteProfiles ACT domain profile. 125 202 IPR002912 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0037 Cone-Chr11:196068 Cone6ag0514 Cone-Chr6:2553284 1.54E-192 dispersed
Cone14ag0597 Cone-Chr14:2961034 Cone6ag0514 Cone-Chr6:2553284 3.30E-173 dispersed
Cone15ag0606 Cone-Chr15:3121332 Cone6ag0514 Cone-Chr6:2553284 3.83E-167 dispersed
Cone16ag1007 Cone-Chr16:9824722 Cone6ag0514 Cone-Chr6:2553284 7.19E-184 dispersed
Cone17ag0807 Cone-Chr17:6378764 Cone6ag0514 Cone-Chr6:2553284 2.93E-114 dispersed
Cone20ag0412 Cone-Chr20:1998928 Cone6ag0514 Cone-Chr6:2553284 8.72E-151 dispersed
Cone6ag0514 Cone-Chr6:2553284 Cone6ag0721 Cone-Chr6:3636025 1.53E-150 dispersed
Cone13ag0891 Cone-Chr13:7892887 Cone6ag0514 Cone-Chr6:2553284 1.13E-237 wgd
Cone19ag0890 Cone-Chr19:6964192 Cone6ag0514 Cone-Chr6:2553284 2.67E-238 wgd
Cone6ag0514 Cone-Chr6:2553284 Cone9ag0526 Cone-Chr9:2511926 6.52E-225 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0514 - - - 0.0