Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0519 ATGACTTCAGCGATCGATTTTCTATGCCTTCAGTCCTCCATAGTCAGTTTCGAAGCTCTTCTTTGTTTTCTCATTTTCACTGCAACCTTCGCTTACTTTCTCGCTCCGGGCGGGTTAGCATGGGCATTATCCAAGTCCAAAACTCGATTCGCCATTCCTGGTCCGAGCGGTTTCCCGCTCGTCGGTTTACTCAACGTCTTCACCGGTTCTATCACACCTCATCGGGTATTAGCCAAGCTCTCTCGCACCTTCCACGCCGAGCAATTAATGGCGTTTTCCGTCGGTCTAACCCGGTTCGTCATATCTAGCCATCCCGATACGGCGAAGGAAGTTCTTAACAGCTCGGCTTTTGCTGATAGACCGGTTAAGGAATCGGCGTACGAGCTTCTCTTCCACAGAGCGATGGGCTTTGCTCCCTACGGTCTCTACTGGAGAGAGCTGAGGAGGATCTCATCGACTCATCTATTCAGCCCTAGACGAATAGCGAGCTTTGAAGGCTTCCGACGTGAAATGGGTTTGAAAATGGTAGAAGAAATAAACTCTCGAATGGCCGACAGTGGTAAGGTACAGATTAAGAGGATACTTCATTTCGCTTCTCTTAACAACATAATGAAGACGGTGTTCGGTATATCGTACGAGTTTACTGATGGCGGAGAAGGGCTTGAGCTTGAGAAAATGGTGAGCGAAGGGTACGAGCTGCTTGGAATCTTCAACTGGAGCGATCATTTTCCCCTTCTAGGCTGGTTAGATTTACAGAGAGTGAGAAAACGATGCCGAAATCTGGTTTCTAGGGTTAATATATTCGTGGGGAAAATCATTGATGATCATAGAACGAGTAGAGCTAATCGTAATGAGGACAAAGATGAAGAGAGTAATGCCACTGGAGATTTCGTCGACGTTCTGCTTGATCTGGAGAAGGATCATAAGCTCAACGACTCGGATATGATCGCTATTCTTTGGGAAATGATTTTTCGAGGGACAGATACGGTCGCTATTCTACTAGAATGGACACTTGCTAGAATGGTATTACATCCAGAAATCCAATCCAAAGCACAGTCAGAAATCGATTTGGTTGTCGGAAACTCTGCCCGTCCGGTATCCGATTCCGATATCTCAAGCTTACCATATCTACAATCCATAGTGAAGGAATGTCTGAGAATGCACCCTCCTGGCCCATTACTCTCATGGGCCCGTCTAGCAATCCACGACGTTTGTATATCTGGAAACTTCATTCCGGCGGGAACTACAGCCATGGTGAATATGTGGGCCATAACGCACGACGAAAAAGTCTGGTCCGAACCGGAGACGTTCAAGCCGGAACGATTCATGGAAGAGGAAGTGACTGTGTTGGGAAGTGATCTGAGGTTGGCACCGTTCGGGTCGGGCAGACGGGTTTGTCCGGGAAAAGCAATGGGGTTAGCCACCGTGCATCTCTGGCTTGCCCGGTTGCTTCAGTGCTTCAAGTGGGTTCCCGCCGACGGTTGTGGTGGCGTGGACTTGTCAGAATGCCTCAAGCTATCAATGGAGATGAACAGTCCTCTTGTTTGTAAGGCCGTGCCTAGGTCTGTTGCCGCTGTTTGA 1581 48.45 MTSAIDFLCLQSSIVSFEALLCFLIFTATFAYFLAPGGLAWALSKSKTRFAIPGPSGFPLVGLLNVFTGSITPHRVLAKLSRTFHAEQLMAFSVGLTRFVISSHPDTAKEVLNSSAFADRPVKESAYELLFHRAMGFAPYGLYWRELRRISSTHLFSPRRIASFEGFRREMGLKMVEEINSRMADSGKVQIKRILHFASLNNIMKTVFGISYEFTDGGEGLELEKMVSEGYELLGIFNWSDHFPLLGWLDLQRVRKRCRNLVSRVNIFVGKIIDDHRTSRANRNEDKDEESNATGDFVDVLLDLEKDHKLNDSDMIAILWEMIFRGTDTVAILLEWTLARMVLHPEIQSKAQSEIDLVVGNSARPVSDSDISSLPYLQSIVKECLRMHPPGPLLSWARLAIHDVCISGNFIPAGTTAMVNMWAITHDEKVWSEPETFKPERFMEEEVTVLGSDLRLAPFGSGRRVCPGKAMGLATVHLWLARLLQCFKWVPADGCGGVDLSECLKLSMEMNSPLVCKAVPRSVAAV 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2591809 2593843 - Conep06aG0053100.1 Cone6ag0519 439403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0519 526 Gene3D Cytochrome P450 41 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PANTHER CYTOCHROME P450 78A7-RELATED 17 518 IPR051996 -
Cone6ag0519 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 CDD CYP78 85 514 - -
Cone6ag0519 526 FunFam Cytochrome P450 78A5 44 521 - -
Cone6ag0519 526 Pfam Cytochrome P450 53 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 SUPERFAMILY Cytochrome P450 52 521 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag0519 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0515 Cone-Chr11:2677425 Cone6ag0519 Cone-Chr6:2591809 1.40E-173 dispersed
Cone15ag0480 Cone-Chr15:2267032 Cone6ag0519 Cone-Chr6:2591809 2.90E-161 dispersed
Cone16ag0218 Cone-Chr16:1516225 Cone6ag0519 Cone-Chr6:2591809 3.72E-240 dispersed
Cone18ag0995 Cone-Chr18:7308166 Cone6ag0519 Cone-Chr6:2591809 1.91E-173 dispersed
Cone6ag0519 Cone-Chr6:2591809 Cone8ag0751 Cone-Chr8:7588980 1.34E-176 dispersed
Cone2ag0555 Cone-Chr2:3128428 Cone6ag0519 Cone-Chr6:2591809 1.17E-57 wgd
Cone6ag0519 Cone-Chr6:2591809 Cone9ag0534 Cone-Chr9:2552386 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0519 K20619 - mdm:103416489 761.14