Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0528 ATGTCCCATAAAAGATTCCATGGTCCCTCCCTCACGCTGCAATCGAAGTGTACAGATTTCAAAAGGGGGAGCAAGAGTCCAGACTCGGAATCGGATTCGGTAATGATCGGGATGGAGAAGCTGAAAATGCGGCGGTGCATTTTAATTTTACTGGCAATGGCTGCAACCCTACAAAAGGCAATGGCGCATGGACCTCATCCTCTCGCCCACATTGATATCCACAAGACTGTTTTTGCACTTAATTCTCAAGCTTACATCAAAGCCTCCCCTTCACTTCTCGGTCTCTCTGGACAAAATTCAGAATATGTCACTGTCGAGTATCAGAATCCTAATCCATTTATTGAGGATTTTGTCGCAGTTTTTTCCCCTGCCAATTTCAGTGCTGCTTCCTGTCCGAAAGAAAATCCAAGGGATCTTGCTCCACTGTTGTGCACTGCACCTATTAAGTATCAGTATGCAAATTACTCTAATTCTAAGTACAAAGCGACAGGGAAAGGTTCGCTGAAGCTTCAATTGATTAAACAGAGATCTGACTTTTCTTTTGGATTATTTACTGGTGGAGTATCAAATCCCAAGCTGGTAGCAGTTTCAAATACAGTCACATTCCTGAACCCAAATGCTCCAGTTTATCCATGCTTAGCACAAGGAAAACTATGGAATGAAATGACTGTAACATGGACCAGTGGATATGGGATTGATGTAGCAGAGCCTTCTGTAGTATGGGGTCCGGTAGGAGGAGTCAATTTTAGTTCCCCCGCTGCAACGCTCACATTTGATTGCAACACCATGTGTGATGCACCAGCCAGGACAGTAGGGTGGCGTGATCCAGGGTATATACATACTGCTTTTCTGAAGGAATTGTGGCCCAACAGGAAATATGTGTATAAGCTTGGGCATAAATTAATCAATGGTACTTACATCTGGAGTCCAGAATATTTGTTTAAATCATCCCCATATCCTGGTCAAAATTCTCTGCAACGTGTTATCGTATTTGGTGACATGGGAAAGGGTGAAGAAGATGGTTCCTACGAGTATAACGACTTCCAGCCTGGCTCTTTGAACACAACAAAGCAGCTTGTACAAGACTTGGACAACTATGATATAGTCTTCCACAATGGGGATATTGTCTACGCTGAAGGATACGTATCACAGTGGGACCAATTCACTGCACAGATAGAACCAATTGCATCAACTAAACCTTACATGATTTCAAGCGGTAACCATGAGAGAGACTGGCCCGGAACAGGATCCTTCTACCAGAACAGAGATTCAGGGGGCGAATGTGGTGTATTAGCTGAAACCATGTTTTATGTTCCTGCTGAAAATAGGGCTCAGTTCTGGTATTCTACTGATTATGGCATGTTCAGATTCTGCGTAGCACACACTGAACTTGATTGGAGAGAGGGTTCGGAGCAATACAAATTCATCGAGAACTGCCTAGCCTCAGTTGACAGACAAAAGCAACCGTGGCTCATCTTTCTTGCTCACAGAGTGTTAGGCTATTCTTCTGCCGGCTTTTATGTCGCAGAGGGATCGTTTGAGGAACCAATGGGAAGGGAGAGCCTTCAGAAACTCTGGCAAAAGTATAAGGTGGACATTGCCATGTTTGGCCATGTACACAATTATGAAAGATCATGTCCTGTTTACGAGAATATATGCACTAGCAAGGAGAAGAGCAGTTACAAGGGAAGCTTAAACGGGACAATACATGTGGTGGCTGGAGGTGGCGGAGCGAGCCTTGCAACATTTGCTCCGGTCAACACAACTTGGAGCATATACAAAGACTACGATTATGGCTTCACTAAACTCACTGCATTCAACAATTCCCACATGCTTTTTGAGTACAAGAAGAGCAGAGATGGAAAAGTCTACGACTCTTTCACCATAACCAGAGATTACAGGGACATCTTGGCCTCCACTGTTGATAGTTCTTCACCCATAACTTTGGCTTCTTAA 1956 43.97 MSHKRFHGPSLTLQSKCTDFKRGSKSPDSESDSVMIGMEKLKMRRCILILLAMAATLQKAMAHGPHPLAHIDIHKTVFALNSQAYIKASPSLLGLSGQNSEYVTVEYQNPNPFIEDFVAVFSPANFSAASCPKENPRDLAPLLCTAPIKYQYANYSNSKYKATGKGSLKLQLIKQRSDFSFGLFTGGVSNPKLVAVSNTVTFLNPNAPVYPCLAQGKLWNEMTVTWTSGYGIDVAEPSVVWGPVGGVNFSSPAATLTFDCNTMCDAPARTVGWRDPGYIHTAFLKELWPNRKYVYKLGHKLINGTYIWSPEYLFKSSPYPGQNSLQRVIVFGDMGKGEEDGSYEYNDFQPGSLNTTKQLVQDLDNYDIVFHNGDIVYAEGYVSQWDQFTAQIEPIASTKPYMISSGNHERDWPGTGSFYQNRDSGGECGVLAETMFYVPAENRAQFWYSTDYGMFRFCVAHTELDWREGSEQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGRESLQKLWQKYKVDIAMFGHVHNYERSCPVYENICTSKEKSSYKGSLNGTIHVVAGGGGASLATFAPVNTTWSIYKDYDYGFTKLTAFNNSHMLFEYKKSRDGKVYDSFTITRDYRDILASTVDSSSPITLAS 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2623351 2627074 - Conep06aG0054000.1 Cone6ag0528 439412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0528 651 Pfam Iron/zinc purple acid phosphatase-like protein C 567 626 IPR025733 -
Cone6ag0528 651 Pfam Purple acid Phosphatase, N-terminal domain 218 315 IPR015914 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone6ag0528 651 PANTHER PURPLE ACID PHOSPHATASE-RELATED 60 634 - -
Cone6ag0528 651 SUPERFAMILY Purple acid phosphatase, N-terminal domain 186 318 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone6ag0528 651 Pfam Fn3-like domain from Purple Acid Phosphatase 86 204 IPR040974 -
Cone6ag0528 651 SUPERFAMILY Metallo-dependent phosphatases 326 633 IPR029052 -
Cone6ag0528 651 Gene3D - 321 635 IPR029052 -
Cone6ag0528 651 CDD MPP_PAPs 326 631 IPR041792 -
Cone6ag0528 651 Pfam Calcineurin-like phosphoesterase 327 542 IPR004843 GO:0016787(InterPro)
Cone6ag0528 651 Gene3D - 208 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0528 Cone-Chr6:2623351 Cone9ag0540 Cone-Chr9:2580053 0 dispersed
Cone6ag0528 Cone-Chr6:2623351 Cone9ag0538 Cone-Chr9:2573539 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0528 K22390 - gmx:100817130 977.622