Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0528 ATGTCCCATAAAAGATTCCATGGTCCCTCCCTCACGCTGCAATCGAAGTGTACAGATTTCAAAAGGGGGAGCAAGAGTCCAGACTCGGAATCGGATTCGGTAATGATCGGGATGGAGAAGCTGAAAATGCGGCGGTGCATTTTAATTTTACTGGCAATGGCTGCAACCCTACAAAAGGCAATGGCGCATGGACCTCATCCTCTCGCCCACATTGATATCCACAAGACTGTTTTTGCACTTAATTCTCAAGCTTACATCAAAGCCTCCCCTTCACTTCTCGGTCTCTCTGGACAAAATTCAGAATATGTCACTGTCGAGTATCAGAATCCTAATCCATTTATTGAGGATTTTGTCGCAGTTTTTTCCCCTGCCAATTTCAGTGCTGCTTCCTGTCCGAAAGAAAATCCAAGGGATCTTGCTCCACTGTTGTGCACTGCACCTATTAAGTATCAGTATGCAAATTACTCTAATTCTAAGTACAAAGCGACAGGGAAAGGTTCGCTGAAGCTTCAATTGATTAAACAGAGATCTGACTTTTCTTTTGGATTATTTACTGGTGGAGTATCAAATCCCAAGCTGGTAGCAGTTTCAAATACAGTCACATTCCTGAACCCAAATGCTCCAGTTTATCCATGCTTAGCACAAGGAAAACTATGGAATGAAATGACTGTAACATGGACCAGTGGATATGGGATTGATGTAGCAGAGCCTTCTGTAGTATGGGGTCCGGTAGGAGGAGTCAATTTTAGTTCCCCCGCTGCAACGCTCACATTTGATTGCAACACCATGTGTGATGCACCAGCCAGGACAGTAGGGTGGCGTGATCCAGGGTATATACATACTGCTTTTCTGAAGGAATTGTGGCCCAACAGGAAATATGTGTATAAGCTTGGGCATAAATTAATCAATGGTACTTACATCTGGAGTCCAGAATATTTGTTTAAATCATCCCCATATCCTGGTCAAAATTCTCTGCAACGTGTTATCGTATTTGGTGACATGGGAAAGGGTGAAGAAGATGGTTCCTACGAGTATAACGACTTCCAGCCTGGCTCTTTGAACACAACAAAGCAGCTTGTACAAGACTTGGACAACTATGATATAGTCTTCCACAATGGGGATATTGTCTACGCTGAAGGATACGTATCACAGTGGGACCAATTCACTGCACAGATAGAACCAATTGCATCAACTAAACCTTACATGATTTCAAGCGGTAACCATGAGAGAGACTGGCCCGGAACAGGATCCTTCTACCAGAACAGAGATTCAGGGGGCGAATGTGGTGTATTAGCTGAAACCATGTTTTATGTTCCTGCTGAAAATAGGGCTCAGTTCTGGTATTCTACTGATTATGGCATGTTCAGATTCTGCGTAGCACACACTGAACTTGATTGGAGAGAGGGTTCGGAGCAATACAAATTCATCGAGAACTGCCTAGCCTCAGTTGACAGACAAAAGCAACCGTGGCTCATCTTTCTTGCTCACAGAGTGTTAGGCTATTCTTCTGCCGGCTTTTATGTCGCAGAGGGATCGTTTGAGGAACCAATGGGAAGGGAGAGCCTTCAGAAACTCTGGCAAAAGTATAAGGTGGACATTGCCATGTTTGGCCATGTACACAATTATGAAAGATCATGTCCTGTTTACGAGAATATATGCACTAGCAAGGAGAAGAGCAGTTACAAGGGAAGCTTAAACGGGACAATACATGTGGTGGCTGGAGGTGGCGGAGCGAGCCTTGCAACATTTGCTCCGGTCAACACAACTTGGAGCATATACAAAGACTACGATTATGGCTTCACTAAACTCACTGCATTCAACAATTCCCACATGCTTTTTGAGTACAAGAAGAGCAGAGATGGAAAAGTCTACGACTCTTTCACCATAACCAGAGATTACAGGGACATCTTGGCCTCCACTGTTGATAGTTCTTCACCCATAACTTTGGCTTCTTAA 1956 43.97 MSHKRFHGPSLTLQSKCTDFKRGSKSPDSESDSVMIGMEKLKMRRCILILLAMAATLQKAMAHGPHPLAHIDIHKTVFALNSQAYIKASPSLLGLSGQNSEYVTVEYQNPNPFIEDFVAVFSPANFSAASCPKENPRDLAPLLCTAPIKYQYANYSNSKYKATGKGSLKLQLIKQRSDFSFGLFTGGVSNPKLVAVSNTVTFLNPNAPVYPCLAQGKLWNEMTVTWTSGYGIDVAEPSVVWGPVGGVNFSSPAATLTFDCNTMCDAPARTVGWRDPGYIHTAFLKELWPNRKYVYKLGHKLINGTYIWSPEYLFKSSPYPGQNSLQRVIVFGDMGKGEEDGSYEYNDFQPGSLNTTKQLVQDLDNYDIVFHNGDIVYAEGYVSQWDQFTAQIEPIASTKPYMISSGNHERDWPGTGSFYQNRDSGGECGVLAETMFYVPAENRAQFWYSTDYGMFRFCVAHTELDWREGSEQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGRESLQKLWQKYKVDIAMFGHVHNYERSCPVYENICTSKEKSSYKGSLNGTIHVVAGGGGASLATFAPVNTTWSIYKDYDYGFTKLTAFNNSHMLFEYKKSRDGKVYDSFTITRDYRDILASTVDSSSPITLAS 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2623351 2627074 - Conep06aG0054000.1 Cone6ag0528 439412

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0528 651 Pfam Iron/zinc purple acid phosphatase-like protein C 567 626 IPR025733 -
Cone6ag0528 651 Pfam Purple acid Phosphatase, N-terminal domain 218 315 IPR015914 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone6ag0528 651 PANTHER PURPLE ACID PHOSPHATASE-RELATED 60 634 - -
Cone6ag0528 651 SUPERFAMILY Purple acid phosphatase, N-terminal domain 186 318 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone6ag0528 651 Pfam Fn3-like domain from Purple Acid Phosphatase 86 204 IPR040974 -
Cone6ag0528 651 SUPERFAMILY Metallo-dependent phosphatases 326 633 IPR029052 -
Cone6ag0528 651 Gene3D - 321 635 IPR029052 -
Cone6ag0528 651 CDD MPP_PAPs 326 631 IPR041792 -
Cone6ag0528 651 Pfam Calcineurin-like phosphoesterase 327 542 IPR004843 GO:0016787(InterPro)
Cone6ag0528 651 Gene3D - 208 319 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0528 K22390 - - gmx:100817130 977.622
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0528 Cone-Chr6:2623351 Cone9ag0540 Cone-Chr9:2580053 0 dispersed
Cone6ag0528 Cone-Chr6:2623351 Cone9ag0538 Cone-Chr9:2573539 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g38 Blo01g00453 . Bda01g02128 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0528 Cone9ag0540 . . . . . . . . . Bpe02g02315 Bma01g00122 . . . . . . . . . Cpe07g00088 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007198 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 4 1 37