Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0532 ATGTCGTCGTCGCCCAAGAAGGAGAGAGAGACCCTGGTCTACATGGCCAAGCTCGCCGAACAGGCCGAGCGTTACGATGAAATGGTAGAATATATGAAGAACATTGCGAAACTTGATTGTGAGCTGACTGTAGAGGAGAGGAACCTTCTTTCTGTTGGATACAAAAATGTTATAGGTGCTAGAAGAGCATCATGGCGCATTATGTCTTCCATTGAGCAGAAGGAAGAGTCTAAGGGGAATGAGAACAATGTTAAACTGATCCAAGATTACCACTACAAGGTAGAAGAAGAGCTCTCCAAGATTTGCAGTGATATTCTGTCCATCATAGACAAGCACCTTATTCCCTCTTCCACCTCTGGAGAAGCCACTGTCTTCTACTGCAAAATGAAAGGTGATTATTATCGCTATCTTGCTGAGTTTAAGATTGACCAGGATAGGAAAGAGGCCGCAGAGCAGTCATTGAAGGGATATGAGGCTGCTTCAGCTACTGCAAACACTGACCTTTCATCAACCCACCCAATCCGTCTTGGCCTTGCTCTCAACTTCTCTGTCTTTTACTATGAGATCATGAATTCTCCCGAGAGCTTGTCATTTGGCTAA 600 44.67 MSSSPKKERETLVYMAKLAEQAERYDEMVEYMKNIAKLDCELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIQDYHYKVEEELSKICSDILSIIDKHLIPSSTSGEATVFYCKMKGDYYRYLAEFKIDQDRKEAAEQSLKGYEAASATANTDLSSTHPIRLGLALNFSVFYYEIMNSPESLSFG 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2643159 2645777 - Conep06aG0054400.1 Cone6ag0532 439416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0532 199 PANTHER 14-3-3 PROTEIN 8 194 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone6ag0532 199 PIRSF 14-3-3 3 197 IPR000308 -
Cone6ag0532 199 ProSitePatterns 14-3-3 proteins signature 1. 47 57 IPR023409 -
Cone6ag0532 199 Gene3D - 1 196 IPR036815 -
Cone6ag0532 199 SMART 1433_4 9 199 IPR023410 -
Cone6ag0532 199 SUPERFAMILY 14-3-3 protein 8 194 IPR036815 -
Cone6ag0532 199 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Cone6ag0532 199 PRINTS 14-3-3 protein zeta signature 41 70 IPR000308 -
Cone6ag0532 199 PRINTS 14-3-3 protein zeta signature 121 143 IPR000308 -
Cone6ag0532 199 PRINTS 14-3-3 protein zeta signature 90 114 IPR000308 -
Cone6ag0532 199 PRINTS 14-3-3 protein zeta signature 183 199 IPR000308 -
Cone6ag0532 199 Pfam 14-3-3 protein 15 194 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0532 Cone-Chr6:2643159 Cone8ag1540 Cone-Chr8:11568544 8.17E-96 dispersed
Cone19ag0905 Cone-Chr19:7049179 Cone6ag0532 Cone-Chr6:2643159 1.01E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0532 K06630 - rcu:8264729 340.502