Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0539 | ATGTTCAACACAGTGTTGGGAAAGAAAATTGCTATTATTGGATTCGCCTTTAAGAAAGATACAGGGGATACTAGAGAGACACCTGCAATTGATGTGTGTAAAGGGCTCATAGGAGATAAAGCAACTTTAAGCATATATGATCCGCAAGTTTCTGAGGACCAGATCCAGAGAGATCTTTCAATGAAGAAGTTTGATTGGGACCATCCTGTTCATCTTCAGCCCATGAGCCCTACTGCAAAAAAGCAAGTTAGTGTTGTTTGGGATGCTTATGAGGCAACAAAAGATGCTCATGGAGTTTGCATTTTGACCGAGTGGTATGAATTCAAGAAGCTTGATTATCAGAAGATTTACGATGATATGCAGAAACCAGCATTTGTTTTTGACGGCCAGAGTGTTGTAGATGCTGAGAAGCTGAGGCAGATAGGGTTTATCGTTTACTCAATTGGTAAGCCGCTCGATCACTGGTTCAAGGATATTCCGGCAGTGGCTTAA | 492 | 41.46 | MFNTVLGKKIAIIGFAFKKDTGDTRETPAIDVCKGLIGDKATLSIYDPQVSEDQIQRDLSMKKFDWDHPVHLQPMSPTAKKQVSVVWDAYEATKDAHGVCILTEWYEFKKLDYQKIYDDMQKPAFVFDGQSVVDAEKLRQIGFIVYSIGKPLDHWFKDIPAVA | 163 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2660483 | 2660974 | + | Conep06aG0055200.1 | Cone6ag0539 | 439423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0539 | 163 | SUPERFAMILY | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 2 | 146 | IPR036220 | - | |
Cone6ag0539 | 163 | Pfam | UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain | 11 | 134 | IPR014027 | GO:0016616(InterPro)|GO:0051287(InterPro) | |
Cone6ag0539 | 163 | FunFam | Putative UDP-glucose 6-dehydrogenase | 1 | 160 | - | - | |
Cone6ag0539 | 163 | Gene3D | - | 1 | 162 | - | - | |
Cone6ag0539 | 163 | PANTHER | UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE | 1 | 154 | IPR028356 | GO:0003979(InterPro)|GO:0005634(PANTHER)|GO:0006024(PANTHER) | |
Cone6ag0539 | 163 | SMART | UDPG_MGDP_dh_C_a_2_a | 11 | 135 | IPR014027 | GO:0016616(InterPro)|GO:0051287(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0506 | Cone-Chr4:2255719 | Cone6ag0539 | Cone-Chr6:2660483 | 2.24E-99 | dispersed | |
Cone6ag0539 | Cone-Chr6:2660483 | Cone7ag0481 | Cone-Chr7:2209481 | 4.92E-98 | dispersed | |
Cone13ag0043 | Cone-Chr13:260371 | Cone6ag0539 | Cone-Chr6:2660483 | 2.54E-22 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0539 | K00012 | - | mdm:103402836 | 300.827 |