Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0540 ATGGGTTCCAAACGATCTTTTGACAGTGAAGAGTTCGAGGAGATTCCGTGTAAGCACCCTAGACAACATGAAAGTATCAACAAGCCAACCTCATTTTCTGAGTTGACTCCTTTGTATCTCTTCCCCCAGAAACTTGAATTTTCAGGTCAGAATGTGGGAGGCTTTCACGAGCTTCAATGGCATGATGCTCATGAAAAGGATACTGTTACTGAAATCTCAGATTTTGATGACAAGGATCTTGAGAGCAGTAACCCTTTCTCATGGGTCACCAGTATTTCTAGCGAAGAAGAAACTGGGTCCGGAGCAACTACTTTGACTCCATTGTCACCAGAACTCGGTGAATATCATTTCCCTCGAAGAACATTTTCTCCTAGAAAGCAAGTTCCTGTTGGACCGAATCATCAGGCAAGTCTTCCAATATGGTGTGGGCATATTGAAGGGAGCAAGTTGGACATCAATGATAATTTAAAGGAGGAGAAACTGATGGGGACTTGTGTTATTCCAATGCCATACTTGAATTTGCAAGACCAAGAAGATGTAAAAAGTGGAGAATCCCAAGTGAATTGTGACTGCATGGATGAGGGATCTGTTAGATGTATACGGCAACATATCACAGAATCAAGGGAAAAGCTGAGGATAACTCTTGGCGATGAAAAGTTTGTGAATTTGGGGTTCTCAGACATGGGTGAGGAAGTTATTTGCAAATGGAATGAAGAAGAAGAACAGATGTTTCATGATACCGTCTATTCGAATCCTAAATCGTCAGGCCGGAATTTTTGGACTTACCTGTCGGTGGCTTTTCCTTCTCGCAATAAAAAAGAACTTGTTAGCTATTATTTTAATGTATTTATCCTTCGAAGGCGGGCTACTCAGAACCGATCTCAGTTCCTTGATGCTGATAGTGATGATGATGAATGGCAAGGAAGAAGGAATAAGGGTTCTTACAGATTTCGAGTGCAAGAAGAAGATGAAGACTCTGCAATTGAATCACTTGTCGTTCAAGTTGATCATGGTGACCATGAAGCTGATTCCTCTGAAGATGAAGAAAATGGATATATTGATGATGAAAGTGAAGAAGAGGGTGGAGTTGAAGAAGATACAATTGATCCCATTGTTCATAATTTGGACAAGAATGCAGAGAAGGGTCTTCATGGTGGTCAAGATGATTCTTGCATGTCTTTTGAAAGTCAGTTTAAGATGACCGATTTATGTTGTACTGATGATGATACTGTGTCTGAACGGCAGATAACTGGAGTCAAGACTGGGAACGGAAGATCTTTGCGTAGTAACTCCGATGTTTCTGGGTATATTATGTCTGAGCCAAGTGCTATTAAAGCTTGGGATGTTAGGTCGCTTACCCGTCCAGGAGAAGATGCTGATCTTCTACCGACTTGGAAAATGATTGAAGAGATTTTTGGACAAGATGTGGATGTGGAGTTTAACAAGACGGATCATGGGAAAGGCTCCAGTTAG 1473 41.34 MGSKRSFDSEEFEEIPCKHPRQHESINKPTSFSELTPLYLFPQKLEFSGQNVGGFHELQWHDAHEKDTVTEISDFDDKDLESSNPFSWVTSISSEEETGSGATTLTPLSPELGEYHFPRRTFSPRKQVPVGPNHQASLPIWCGHIEGSKLDINDNLKEEKLMGTCVIPMPYLNLQDQEDVKSGESQVNCDCMDEGSVRCIRQHITESREKLRITLGDEKFVNLGFSDMGEEVICKWNEEEEQMFHDTVYSNPKSSGRNFWTYLSVAFPSRNKKELVSYYFNVFILRRRATQNRSQFLDADSDDDEWQGRRNKGSYRFRVQEEDEDSAIESLVVQVDHGDHEADSSEDEENGYIDDESEEEGGVEEDTIDPIVHNLDKNAEKGLHGGQDDSCMSFESQFKMTDLCCTDDDTVSERQITGVKTGNGRSLRSNSDVSGYIMSEPSAIKAWDVRSLTRPGEDADLLPTWKMIEEIFGQDVDVEFNKTDHGKGSS 490
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 2662307 2665544 + Conep06aG0055300.1 Cone6ag0540 439424
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0540 490 MobiDBLite consensus disorder prediction 91 107 - -
Cone6ag0540 490 MobiDBLite consensus disorder prediction 342 365 - -
Cone6ag0540 490 CDD SANT 235 283 IPR001005 -
Cone6ag0540 490 MobiDBLite consensus disorder prediction 91 110 - -
Cone6ag0540 490 MobiDBLite consensus disorder prediction 1 29 - -
Cone6ag0540 490 PANTHER DNA BINDING PROTEIN 1 477 - -
Cone6ag0540 490 MobiDBLite consensus disorder prediction 1 25 - -
Cone6ag0540 490 MobiDBLite consensus disorder prediction 337 366 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0434 Cone-Chr11:2182942 Cone6ag0540 Cone-Chr6:2662307 5.92E-27 dispersed
Cone14ag0369 Cone-Chr14:1724663 Cone6ag0540 Cone-Chr6:2662307 1.62E-29 dispersed
Cone15ag0406 Cone-Chr15:1907204 Cone6ag0540 Cone-Chr6:2662307 3.08E-27 dispersed
Cone18ag1072 Cone-Chr18:7879200 Cone6ag0540 Cone-Chr6:2662307 2.10E-29 dispersed
Cone6ag0540 Cone-Chr6:2662307 Cone9ag0791 Cone-Chr9:3797182 2.35E-26 dispersed
Cone13ag0045 Cone-Chr13:265074 Cone6ag0540 Cone-Chr6:2662307 9.03E-71 wgd
Cone19ag0908 Cone-Chr19:7062956 Cone6ag0540 Cone-Chr6:2662307 7.35E-89 wgd
Cone19ag0050 Cone-Chr19:325094 Cone6ag0540 Cone-Chr6:2662307 1.99E-68 wgd
Cone6ag0540 Cone-Chr6:2662307 Cone9ag0550 Cone-Chr9:2618445 1.29E-298 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0540 - - - 0.0