Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0547 ATGTACAGGAGGGTTGCTACAGATGAAGCAACAGCCACTACCACGGCCCGAGGAGGATCACCAATTGATAATGTGGACTATATTGTTAGTTTGAATCAAGTTCCAAGGTGGAGTGATGCAGAATATAGGACTTCCTTGGAATTTGAGAGTGAAGATCCGTCCTTTTCTAATTCATACTTTCACGATCCTTTAACGTCTTTGTCTGGGTCAGAGGGTGGGATAAATGGAGTGGTTTCAAGGTTTCCTGTTGATCTTGAAATTAACTCTAAGATATATCTATGGAGAGGAAACCCATGGAATCTTGAAGTAGATGCTGTAGTGAATTCTACTAATGAGAACCTGGATGAAGCACACAGTAGCCCTGGACTTCATGCTGCAGCTGGTCCTGGTCTTCCAGAAGAATGTGCCTCATTGGGTGGCTGCCGCACCGGGATGGCAAAAGTAACTAATGCATATGACCTTCCTGCTAGGAGGGTTATACATACTGTTGGTCCAAAGTATGCAATTAAATATCATACTGCTGCAGAGACTGCTCTAAGTCATTGTTATCGTTCTTGCCTTGAGCTTCTTATTGAAAATGGGCTACAAAGCATTGCAATGGGATGCATATATACTGAGGCTAAAAACTATCCCTGTGAACCTGCTGCACATGTGGCTATAAGGACTGTCCGGAGGTTTCTTGAGAAGCAAAAGGATAAAATTAAAGCTGTTGTATTTTGTACCACCACATCATCGGATACTGAAATATATAAAAGATTGCTTCCACTCTACTTTCCCCGTGATAAACATGAGGAGCAAGTTGCCCTGTTGAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACTATTATAGATGAACGTAAAATCAGGATAAAGCCTTTGCCCAAAAAGAATATTCCAAAACCACCTCAAACTCCAGATGATCCTCCAATCAGTGATGTTGGGTTAGCACGAAGGACTACTTCATATTTGGATCCTGCCTTCATGTCCTTGATCAAAGATCCTGATCAGAGACGCAAGGAACAGTGGGAAAAAACTGCTCAAGCAAGGAGTGGATGGAATTGTGCTAAAATGCTTGGATTTGGTGACCTTGGTGGGCCACCGTTGTCTGTTGCTGAAGAATACTCACTTCATTCAAGATACCTTACTAAAGCAAATTCTCTCAGTCTATCTGAAATAGCAGAGATGAAAATTGTTTACCGGGGCGGTGTTGACAGTGAAGGCCGTCCGGTAATGGTTGTTGTGGGGGCACATTTTCTGCTTAGGTGTCTTGATCTTGAGCGATTTGTTCTCTATGTAGTGAAGGAATTTGAGCCGCTGCTACAGAAACCTTATACAATTGTGTACTTCCACTCAGCAGCATCTTTACAGCCTCGACCGGACTTGGGATGGATAAGAAGATTACAACAAATTCTTGGCAGGAAACACCAGCGCAATATACGTTCTTCATCCTTCATTTGGACTAAAAGCTGCCATATTGGCTCTACAACTGTTAGTAGACAATGTGGTGTGGAATAA 1521 42.8 MYRRVATDEATATTTARGGSPIDNVDYIVSLNQVPRWSDAEYRTSLEFESEDPSFSNSYFHDPLTSLSGSEGGINGVVSRFPVDLEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLPEECASLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAIKYHTAAETALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPCEPAAHVAIRTVRRFLEKQKDKIKAVVFCTTTSSDTEIYKRLLPLYFPRDKHEEQVALLKLPADVGDENGETIIDERKIRIKPLPKKNIPKPPQTPDDPPISDVGLARRTTSYLDPAFMSLIKDPDQRRKEQWEKTAQARSGWNCAKMLGFGDLGGPPLSVAEEYSLHSRYLTKANSLSLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLLQKPYTIVYFHSAASLQPRPDLGWIRRLQQILGRKHQRNIRSSSFIWTKSCHIGSTTVSRQCGVE 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2693370 2698410 + Conep06aG0056000.1 Cone6ag0547 439431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0547 506 Gene3D Leucine Aminopeptidase, subunit E, domain 1 20 263 IPR043472 -
Cone6ag0547 506 ProSiteProfiles Macro domain profile. 78 258 IPR002589 -
Cone6ag0547 506 MobiDBLite consensus disorder prediction 295 314 - -
Cone6ag0547 506 SMART YBR022w_8 90 219 IPR002589 -
Cone6ag0547 506 Pfam Macro domain 107 219 IPR002589 -
Cone6ag0547 506 SUPERFAMILY CRAL/TRIO domain 392 473 IPR036865 -
Cone6ag0547 506 SUPERFAMILY Macro domain-like 80 287 IPR043472 -
Cone6ag0547 506 Gene3D - 390 491 IPR036865 -
Cone6ag0547 506 Pfam Divergent CRAL/TRIO domain 409 483 IPR001251 -
Cone6ag0547 506 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 25 292 - -
Cone6ag0547 506 CDD Macro_GDAP2-like 89 257 IPR035793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0547 Cone-Chr6:2693370 Cone9ag0558 Cone-Chr9:2642495 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0547 K24997 - cit:102618722 832.402