Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0548 ATGGTGCAGAGTCTGTCATTGTGTACTTCGACATCCTCAATAAATGGCGGGGTTTATGGGTCAAATACTTATGAGAGGAAGCATTTGAAGCTGAGTAAAAATCTTATAGCCTCTATGATTGGTAGAAGTGGAATTTTTCACCGATTCAGACAAGGGTTTTTCTTATCTAGCAAAGCCAATATATCGAGACAGAGAAATTGTGAGGTTAAAGCTGGATGGATGTTTAAAGGGGGTGGGAAGAGGTTGGATGCAAGCTCTGAGTATAGTGACAGAGCTAGTGAGGATATTTTGTTCTTCTTTTTCCAGCTGGACCTAGCAACACGAGTACAGTATGCTTTGAACACAGAGCAGTATGAGATTGCACAACAACTGAGAAACAAGCTGACTGAGGTTGAAGCAGAAGCTATCAAGCAGCAAGATTCAAAAAGGGGATTGTCTTCAAAAAGTGAAGCTCAGGACAAAGCCTTAAGTACTATTTGTCTACGTGGTGACCTGCAGAAAGCTATTGATGGTGAAAATTATGATTTGGCAGCTCAACTGCGGGATGAAATTTCCAAACTGGAAGCAGAGTCCTTAGCTGCATCAGCAAAAGCTCTGGCATATGAAAATGCACAATATTCATTTCGACTGGGGCAGAAAGTGAAGCACAAAATATTTGGCTACAGAGCTGTTGTTTGTGGAATGGATCCAGTGTGCTGCGAATCAAGTTCATGGATGGAGACTGCACAAGTTGAAAAGTTGTCTCAGGGTTCTGCTCAGCCATTTTATCAAGTTTTGGTAGATGTCCGTGCAGATCCTGATCTACTGATCGCATACGTTCCTGAGGAGAATCTTTCAGCCACTGAAGAACCTGACAAGGACAGATTTAATCATCCCTATGTTTCTTTCTTATTTTACGGAATGGATGGAGCGGGAGACTTCATCCCAATCAAGCAATTGCGTGATAAGTACAATAGGCCTCGACATGAAATACCTTTTGATCCACAAGATGATGATAAGAACGATGATTCAGATGCTTGA 1020 41.76 MVQSLSLCTSTSSINGGVYGSNTYERKHLKLSKNLIASMIGRSGIFHRFRQGFFLSSKANISRQRNCEVKAGWMFKGGGKRLDASSEYSDRASEDILFFFFQLDLATRVQYALNTEQYEIAQQLRNKLTEVEAEAIKQQDSKRGLSSKSEAQDKALSTICLRGDLQKAIDGENYDLAAQLRDEISKLEAESLAASAKALAYENAQYSFRLGQKVKHKIFGYRAVVCGMDPVCCESSSWMETAQVEKLSQGSAQPFYQVLVDVRADPDLLIAYVPEENLSATEEPDKDRFNHPYVSFLFYGMDGAGDFIPIKQLRDKYNRPRHEIPFDPQDDDKNDDSDA 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2698891 2702977 + Conep06aG0056100.1 Cone6ag0548 439432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0548 339 Coils Coil 114 141 - -
Cone6ag0548 339 Coils Coil 177 197 - -
Cone6ag0548 339 Pfam Hemimethylated DNA-binding protein YccV like 207 304 IPR011722 GO:0003677(InterPro)
Cone6ag0548 339 PANTHER YCCV-LIKE DOMAIN-CONTAINING PROTEIN 3 332 IPR053189 -
Cone6ag0548 339 FunFam Clp protease adapter protein ClpF, chloroplastic 203 306 - -
Cone6ag0548 339 NCBIfam heat shock protein HspQ 206 307 IPR011722 GO:0003677(InterPro)
Cone6ag0548 339 MobiDBLite consensus disorder prediction 320 339 - -
Cone6ag0548 339 Gene3D - 204 305 IPR036623 GO:0003677(InterPro)
Cone6ag0548 339 Pfam UvrB/uvrC motif 164 189 IPR001943 GO:0005515(InterPro)
Cone6ag0548 339 SUPERFAMILY YccV-like 207 303 IPR036623 GO:0003677(InterPro)
Cone6ag0548 339 SMART YccV_like_2_a 205 309 IPR011722 GO:0003677(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0548 - - - 0.0