Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0569 ATGTATTCGTCCCGAGGGAGTGGTTCGTATGGTCAGCAATCATATCCTGGGCAATCTGCGTATATTCAAAATTTGGGAAATCTTTATGCTGGAAATTCAGTCGGGGTATCTGATGGTGGACCCCAACAATCCTTAGCTTCTCGCCATACATTGACATTGGGTGCTTCTCAGGAAGCAGATGCTACTGGTTATAGGCCTCATTCATCAACTGCTGGTCATTATGGAGGGATGTATAGTTCAGCGTATGGGTCAGCTTCTTTGAGTACTGCCCCACAGGGTTCTTCTGCAAAAGGGGCTGGACCTTCAGCTTTGGAAGGACATGGTGGCTATGCCTCGGCTATCACAGATTCCCCTAAGTTTGTATCTGAATATGTCCCCACTTCAAGCCATGGATATGGTCATAAAAGTGACCATTTGTTCGCTGAGAAGATCCCTGAGTATTCTGCTATTGACAGACGGCAGTATAGTGAGCGGCAAAGTGCTTATATGGGAAGGGACTTGCAAAGTGAGCCAACAGGAAGATTTGCTGAAACAGTTGGTTATGGTCATCAGCATCAACCTGACATCTATGATCGCCTTGATTCGGCTGCCCTACTTCGACAAGAACAATTGCTAAAAGTGCAGTCGCTACAATCGAGCACCCTTGATGGGAGTTCAAGACAAAATGATTATCTTGCAGCAAGGGCTGCTGCTAGTCGGCATTCTACCCAAGATCTTCTCTCTTACGGAGAAAGAGTAGATTCTGATCCTCGCAATATATCATCTCTTAGTTCGTCATACAGTGGACTGCCTTCTGCATCGATATTAGGTGCTGCTCCACAGAGAAATATAGATGAACTCATCTATTCTCAAAGTTCGTCGAATCCCGGATATGGAGTAAGCCTTCCTCCTGGCAGAGACTATGCTACCGGAAAAGGACTCCATGGCACATCTCTCGAATCAGAATATTCAAATAGCTTGTTAGCTCGTAGTAATTATCCAAGGAACGATGAGCATAAGGATGATAGAGCTGGTTATCTCCGAGAATTCGAGCTTAGGGAAGAGGAGCGTAGAAGGGAGCGTTTGCGCATGAGAGAGAAAGACAGAGAGAGGGAGAAGGATCGGGAACGAGAACGTGAACGAGAGAGAGAGCGCGAAAGAGAACGTGCTTTGGAACGACACAAGGAAAGAGAGCGAGAGAGCAGACGTGGACTTGAGTTTAGGCGGACACGTACTCCTCCGCCCAGGGTGTCGAAGGACCGACGTGGGTCCTCTTTGTCTAAGGAGGGGAGACCCTTGCGGCGAGATTCTCCCCCGCATCGTGACATGGCGTATAGGCGTCGTTCACCTGTGGAAGAAAAAAGGAGAGAATATATCTGCAAGGTCCATTCATCCAGCGTGGTTCAAGTAGAGAGGGATTATTTGTCAATTGACAAGAGATATCCCCGGCTTTTTGTATCCCCTGAATTTTCTAAGGTTGTTGTCAATTGGCCAAAGGAAAAACTTAAGCTTTCTATCCACACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGAAGGGAGTGCAGCAGATTCAAAAGAGCCATCTTCCGAAGCTTTGGTTAAAGAAACTGAGAAACCAGAACCTGTGAATACAATTTGGAATGCTAAGATTATTCTGATGAGTGGACTCAGTAAAACTGCTCTTGAGGACTTGTCATCTGAAAAACTTTCTGATGGCCGCATACCCCATATCAGCAATATACTTAGGTTTGCCATCCTTAAAAAGGATCACAGGTTTATGGCGATTGGTGGTCCATGGAAATCATCAGACGGTGGTGACCCTTTGGTCGATGATATCTCATTAATTCAAACAGCTCTTAGACATGCAAAGGATGTTTCACATCTTGATTTACAAAACTGTCACCAATGGAATCGTTTTCTGGAGATTCACTATGATAGAATTGGAAAAGATGGATTTTTTAGCCATAAAGAGGTCACTGTGCTCTTTGTTCCAGATTTGTCCGAGTGTCTCCCTTCATTGGATACTTGGCGAGAACAATGGCTTGCTCACAAAAAGGCTGTAGAGAGAGAAAGGCAACTTTCTTTGAAAAAAGAGAGGTCTAGGGAGCTGAAGGAAGGGCTGGAAGATGGAAAAAAGGTAGACAGACCAGAGAAAAAGCAAGAGTCAGCAGCCTCCGAACAAGCAGATGTCCGCAAAAGAGAGAGAGATGGAAAAGATGTCAAAAAGAGTGATGACAAGGGTGAAGAAAGTGAAAAGAAAATTGAGAAGAAATATGGAGATGAATCGGGTGTAGAAGGAGATACTACCGAGAAAAAAGTGCAGGGTGAAGCCTCTAACACTCCAACAACTTTGAAGCCTGGGATGAAAAAGATCATAAAGAAGATTGTCAAACAGAAAGCTGCTCCTAAGACTACAGCTACTGATTCTGCTACCAAACAGAATGATAAGGTGGATGAGATAGGCAATGGGGAGAAGAATTTGAACTCAGAGATTTCTGGTCAACAAGGTGAATTGTCTGCTGAACCCGCTGGGGTTAAAACTTCTGTGAGGAAAAAGATTATTAAGAGAGTAAAAACTGCTCCAGGAAAAACAAAAGCAGAAAATGAAGGCGATAGCATTGAAGATAAACAAAAGGATGGAGCAGATCCCAATAACGTGGTGGCAGTGAGGCAAGATAGTGTTACAAAAACATTTATAAAGAAGAAAGTACTTAGGAGGGTACCCAAACGAAAGATTTCTGGAGAAGAATTGAATGATGGGGCAAATGTCACGAATAAAGATGGAGATAAGGATGAGAAATTGGTGACTGAAAATACAGGGAAGAGCACCAGTGAAGCAGAAACTCCAGGGAAGGAGGTAAAAAAGACAGAAAAGAAGACAATTGCTAAAACAAAGCCAAAAAATCCTAACAAGGAGGACAAGACGGATGGAAAGGCAAGTGGCAGCAAAATTGGCTCTGGGGCTAAAGTGGTGCTTGAGGCTGACAAGCAGAAAACCTCTAAAAATGATGCTGATCATGGAAAAAGAGAAAAGTTGAAAGATGGGGAAAAGTCAAAAATTGAGAAAGAGAAAAAGAAGTCTGAAGAACCTCCTCGTCCTGGATTCATTCTAAAAACAAAGTTGGGCAAAGACTCTAAACTATGGTCAATATCACTTTCTCTAGAGTCGCTCTTGGGCTATACTGCTAAGGACATTGAAGAGTCAACATTCGAGCTTTCATTATTTGCCGAGTCACTGCATGAAATGCTTCAATATCAGATGGGATGTCGTCTTTTAGCTTTCCTGCAGAAATTGCGAGTGAAATTTGTAACCGATAGAAATATGCAAAAGAGGCAATGGGAAAAAGTCGGAAAAGAAAATGACCAAAAGGTGCCAACAAAACGTCTGAAAACCAGTGAGCTTCCTGCTGTAAAGGAATCAAGTAAATCTGAAACAAGTCCTTCTCAACCAGATGAAGAAAAAACTAAGGTTGAGGAGGATAAATATGCTGATCCTATAGAGGACGTGAAGACAGAAAGTGAAACAGATAATGAGGAAGATCCCGAAGAAGATCCAGAGGAAGATCCCGAAGAGTATGAAGAAATGGAGGATGATAGTCCTCAGAATGAGTCGTCTAAAGAGTGCGATGACGAGGGGAAGACGCACATAAATACTGAGCTCAACAAGATGGAAGGTAGTGAGAAGGATGAAGCTGCAGGATCTATGGACTTGAAAGCTTTGGACCCTAAGCTGGAACCGAATAAGGATGAGTCGGAAAGAAAAGAGTCAGAAACTGAGACGAAAAAGAAGGAAGTTTCTCCTCCAAAAGAGGCTACTTTCGATAAAGAACTCCTTCAGGCTTTCAGATTTTTTGATCGAAATCAAGCTGGCTTCATTAGGGTTGAAGATTTAAGGGTGATTATTCACAGCTTAGGGAAGTTCCTCTCTCACAGGGATGTGAAGGAACTTGTACAAAGTGCATTGTTGGAGAGCAATACCGGAAGGGATGACCGTATCCTTTACGGTAAGCTTGTAAGAATGGTCGGATTTTGA 4014 43.25 MYSSRGSGSYGQQSYPGQSAYIQNLGNLYAGNSVGVSDGGPQQSLASRHTLTLGASQEADATGYRPHSSTAGHYGGMYSSAYGSASLSTAPQGSSAKGAGPSALEGHGGYASAITDSPKFVSEYVPTSSHGYGHKSDHLFAEKIPEYSAIDRRQYSERQSAYMGRDLQSEPTGRFAETVGYGHQHQPDIYDRLDSAALLRQEQLLKVQSLQSSTLDGSSRQNDYLAARAAASRHSTQDLLSYGERVDSDPRNISSLSSSYSGLPSASILGAAPQRNIDELIYSQSSSNPGYGVSLPPGRDYATGKGLHGTSLESEYSNSLLARSNYPRNDEHKDDRAGYLREFELREEERRRERLRMREKDREREKDRERERERERERERERALERHKERERESRRGLEFRRTRTPPPRVSKDRRGSSLSKEGRPLRRDSPPHRDMAYRRRSPVEEKRREYICKVHSSSVVQVERDYLSIDKRYPRLFVSPEFSKVVVNWPKEKLKLSIHTPVSFEHDFVEEGSAADSKEPSSEALVKETEKPEPVNTIWNAKIILMSGLSKTALEDLSSEKLSDGRIPHISNILRFAILKKDHRFMAIGGPWKSSDGGDPLVDDISLIQTALRHAKDVSHLDLQNCHQWNRFLEIHYDRIGKDGFFSHKEVTVLFVPDLSECLPSLDTWREQWLAHKKAVERERQLSLKKERSRELKEGLEDGKKVDRPEKKQESAASEQADVRKRERDGKDVKKSDDKGEESEKKIEKKYGDESGVEGDTTEKKVQGEASNTPTTLKPGMKKIIKKIVKQKAAPKTTATDSATKQNDKVDEIGNGEKNLNSEISGQQGELSAEPAGVKTSVRKKIIKRVKTAPGKTKAENEGDSIEDKQKDGADPNNVVAVRQDSVTKTFIKKKVLRRVPKRKISGEELNDGANVTNKDGDKDEKLVTENTGKSTSEAETPGKEVKKTEKKTIAKTKPKNPNKEDKTDGKASGSKIGSGAKVVLEADKQKTSKNDADHGKREKLKDGEKSKIEKEKKKSEEPPRPGFILKTKLGKDSKLWSISLSLESLLGYTAKDIEESTFELSLFAESLHEMLQYQMGCRLLAFLQKLRVKFVTDRNMQKRQWEKVGKENDQKVPTKRLKTSELPAVKESSKSETSPSQPDEEKTKVEEDKYADPIEDVKTESETDNEEDPEEDPEEDPEEYEEMEDDSPQNESSKECDDEGKTHINTELNKMEGSEKDEAAGSMDLKALDPKLEPNKDESERKESETETKKKEVSPPKEATFDKELLQAFRFFDRNQAGFIRVEDLRVIIHSLGKFLSHRDVKELVQSALLESNTGRDDRILYGKLVRMVGF 1337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2781792 2790177 - Conep06aG0058200.1 Cone6ag0569 439453

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 1139 1164 - -
Cone6ag0569 1337 Pfam BURAN domain 462 549 IPR045354 -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 511 530 - -
Cone6ag0569 1337 SUPERFAMILY EF-hand 1269 1314 IPR011992 -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 692 766 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 1165 1192 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 245 264 - -
Cone6ag0569 1337 Pfam LAIKA domain 1024 1087 IPR045353 -
Cone6ag0569 1337 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 1334 IPR025224 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)
Cone6ag0569 1337 Pfam DBC1 570 685 IPR025954 -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 1107 1131 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 895 1029 - -
Cone6ag0569 1337 SMART DBC1_2 568 692 IPR025954 -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 1107 1263 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 692 882 - -
Cone6ag0569 1337 ProSiteProfiles EF-hand calcium-binding domain profile. 1266 1301 IPR002048 GO:0005509(InterPro)
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 287 310 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 350 442 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 903 932 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 854 875 - -
Cone6ag0569 1337 Coils Coil 345 394 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 988 1027 - -
Cone6ag0569 1337 Gene3D - 1212 1336 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 941 973 - -
Cone6ag0569 1337 MobiDBLite consensus disorder prediction 1193 1263 - -
Cone6ag0569 1337 FunFam ATP/GTP-binding protein family 1267 1335 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0569 K25827 - - mdm:103402876 1242.64
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0569 Cone-Chr6:2781792 Cone9ag0575 Cone-Chr9:2705408 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g936 . Blo16g01111 . . Bpe13g01405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0569 Cone9ag0575 . . . . . . . . . . . Bma06g00700 . . . . . . . . Cpe07g00648 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007311 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 1 1 1 1 1 2 1 1 0 1 1 1 34