Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag0571 | ATGGGAGAGGGAGAGGTTGCGTTATTAGTTTCTTCTTACTCTGAAGAGTTCTGGGTCGGAATGTTGACATGCATCTGCATCATTATGTCGTGGATTTTACTCCATAGATGGAATCAAAGGAATAAGAAAGGCCCAAAAACATGGCCATTAGTAGGAGCAGCAATTGAACAGCTTTTGAACTATGATAGAATGCATGATTGGCTTGTGAAGTACCTGTCGGAGTCCAAAACCGTAGTTGTTCCAATGCCTTTCACAACTTATACATACATTGCAGATCCTGTCAATGTAGAACATGTTCTTAAGAACAATTTCGCAAATTATCCAAAGGGTGAAGTATACCATTCATATATGGAAGTCCTGCTTGGAGACGGAATTTTCAATGCAGACGGTGAGCTATGGAGGAAACAGAGGAAGACTGCAAGCTTTGAATTTGCATCAAAGAATCTGAGGGATTTCAGTACTATAGTTTTCAGAGATTATAGCCTGAAACTCTCTGCCATATTAAGTGTGGCGTCTTCCAATAACCAAGCAGTAGATATGCAGGAACTCTTGATGAGAATGACTTTAGACTCCATATGTAAAGTAGGTTTTGGTGTAGAGATTGGAACATTGGCCCCCAATTTACCCGATAATCAATTTGCTCGAACCTTTGACACAGCAAACATCATTGTGACACTTCGTTTCATTGACCCTTTGTGGAAGCTAAAGAGATTTATGAATGTTGGCTCAGAAGCTCTACTTGATAAGAGCATCAAATCCATTGATGATTTCACCTACACAGTTATTCGAAGAAGGAAAGCAGAGATCAAAGAGACTCGACAGATCAACAATGACAATAAGATAAAGCATGATATATTATCAAGATTTATCGAGCTAGGTGAAGACCCAGAAAACAATTTTACCGACAAGAGCCTTAGGGATGTTGTTCTGAACTTTGTCATCGCTGGCCGGGATACTACAGCTACAACACTCTCATGGGCCATTTACATGATAATGATAAATTCACATGTAGCTGACAAGCTTTACTCGGAACTCAAAACTTGTGAGGAAGAGCAAGCTAAAGAGCAGAAAGTCTCATTATTGCAGTTTGATATAGCTGACCCTAAATCATTCAATAAAAGAATAACACAATTTGCAGAACTCCTAAATTATGATTCACTAGGAAGATTATATTATTTGCATGCTGTTATCACAGAGACGCTCCGTTTATACCCAGCAGTTCCTCAGGATCCTAAGGGAATTTTAGAGGATGATGTTTTACCGGATGGAACAAAAGTAAAAGCAGGAGGCATGGTGACTTATGTGCCCTACTCGATGGGAAGAATGGAGTATAATTGGGGTTCTGATGCAGCTTCTTTTAAGCCAGAGAGGTGGCTTAAAGATGGTTTCTTCCAAAATGTGTCTCCATTCAAATTCACTGCATTTCAGGCTGGACCGAGGATATGTCTAGGGAAGGACTCTGCATATCTGCAAATGAAGATGGCACTAGCAATATTGTGTAGATTTTACCAGTTCAAATTGGTACCCGGTCATCCAGTGAAGTACAGAATGATGACTATCCTATCAATGGCGCATGGCTTGAAGCTTACCGTAGCTAGACGCTCTTAG | 1608 | 40.17 | MGEGEVALLVSSYSEEFWVGMLTCICIIMSWILLHRWNQRNKKGPKTWPLVGAAIEQLLNYDRMHDWLVKYLSESKTVVVPMPFTTYTYIADPVNVEHVLKNNFANYPKGEVYHSYMEVLLGDGIFNADGELWRKQRKTASFEFASKNLRDFSTIVFRDYSLKLSAILSVASSNNQAVDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNQFARTFDTANIIVTLRFIDPLWKLKRFMNVGSEALLDKSIKSIDDFTYTVIRRRKAEIKETRQINNDNKIKHDILSRFIELGEDPENNFTDKSLRDVVLNFVIAGRDTTATTLSWAIYMIMINSHVADKLYSELKTCEEEQAKEQKVSLLQFDIADPKSFNKRITQFAELLNYDSLGRLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGSDAASFKPERWLKDGFFQNVSPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFYQFKLVPGHPVKYRMMTILSMAHGLKLTVARRS | 535 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2796642 | 2798706 | + | Conep06aG0058400.1 | Cone6ag0571 | 439455 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag0571 | 535 | SUPERFAMILY | Cytochrome P450 | 34 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | CDD | CYP86A | 76 | 527 | - | - | |
| Cone6ag0571 | 535 | Gene3D | Cytochrome P450 | 29 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | P450 superfamily signature | 482 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | P450 superfamily signature | 395 | 406 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | FunFam | Alkane hydroxylase MAH1 | 38 | 535 | - | - | |
| Cone6ag0571 | 535 | Pfam | Cytochrome P450 | 44 | 524 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | E-class P450 group I signature | 394 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag0571 | 535 | PANTHER | CYTOCHROME P450 | 28 | 527 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0338 | Cone-Chr15:1571625 | Cone6ag0571 | Cone-Chr6:2796642 | 8.42E-131 | dispersed | |
| Cone6ag0571 | Cone-Chr6:2796642 | Cone8ag0297 | Cone-Chr8:1714016 | 9.04E-118 | dispersed | |
| Cone6ag0571 | Cone-Chr6:2796642 | Cone9ag0577 | Cone-Chr9:2720495 | 5.57E-293 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag0571 | K20495 | - | mdm:103451801 | 906.36 |