Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0595 ATGCGTAGAACCGGAAAGGTTCCAAAATTCTTGTCCCATCGCCTCTTCCCTTCTGCTAGCTATTTGATTTGGTTGGACAGCAAGATGCGGCTTCACATTGATCCAATGCTGATAGTTGAATACTTTTTATGGCGGAAAAATTCTGAATATGTCATTTCAAATCATTATGATCGCCACTGTGTTTGGGTGGAAGTTTTTCAAAATAAGCGTCTGAATAAGTACAATCACACGGCAATTGACGGGAAGTTTGCTTTTTACCGATCGGATGGTCTCACCAAATTGACCCTACAGACCCAAACAATCTCCTTACTAGTTTACTATGCAAGGGGTGAAGCTTGGCATCTTCCAGATGGAGCTTTTGAAACCATAAGCCTTCTCAAAGATAATAGAGTTAAGGTGGTGGTTGTGTCCAATTTTGACACCCGCTTAAGGAAGCTATTGAAGGATCTGAGAGTTTTAAATCTGTTTGATGCCATGGTAATATCTTCAGAGGTTGGATATGAAAAACCGGATGCTAAAATATTCAAAGCTGCTTTAGAACAAGTCAGTGTGGAGGCTGAGAAAGCAGTACATGTCGGAGATGATGAAAAGGCAGATAAGGAAGGAGCAAATGCAGTCGGAATTTCTTGCTTGTAA 636 40.88 MRRTGKVPKFLSHRLFPSASYLIWLDSKMRLHIDPMLIVEYFLWRKNSEYVISNHYDRHCVWVEVFQNKRLNKYNHTAIDGKFAFYRSDGLTKLTLQTQTISLLVYYARGEAWHLPDGAFETISLLKDNRVKVVVVSNFDTRLRKLLKDLRVLNLFDAMVISSEVGYEKPDAKIFKAALEQVSVEAEKAVHVGDDEKADKEGANAVGISCL 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2915284 2916502 + Conep06aG0060800.1 Cone6ag0595 439479

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0595 211 CDD HAD_dREG-2_like 122 211 - -
Cone6ag0595 211 Gene3D - 100 211 IPR023214 -
Cone6ag0595 211 PANTHER - 102 210 - -
Cone6ag0595 211 Pfam TOD1/MUCI70, glycosyltransferase-like domain 1 98 IPR048354 -
Cone6ag0595 211 SUPERFAMILY HAD-like 96 210 IPR036412 -
Cone6ag0595 211 Pfam haloacid dehalogenase-like hydrolase 90 207 - -
Cone6ag0595 211 NCBIfam HAD-IA family hydrolase 125 207 IPR006439 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0595 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0595 Cone-Chr6:2915284 Cone9ag0598 Cone-Chr9:2824874 1.01E-62 dispersed
Cone6ag0595 Cone-Chr6:2915284 Cone9ag0597 Cone-Chr9:2821847 3.54E-49 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g897 . Blo16g01120 . Bda11g01221 Bpe13g01415 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0595 Cone9ag0598 . . . . . . . Bda11g01221 . . . . . . . . . . . . Cpe07g00653 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006918 1 1 1 0 1 1 1 1 1 2 1 1 1 0 1 1 1 2 1 1 1 1 1 1 2 1 1 1 2 1 32