Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0603 ATGGCTGGGAATGCCGACTCTATGTCGATCAAGGTTCCGTACCGTAATCTGAAAGAGGCGGAAGTAGAAATGGTGGATGTGGACGATCTGCATCACCGACAAAATGAGCAGAATTCTAATTCACCTTCTTTTTCTAGTAGGGTTTCCAATGGAAGTCCTGACCTCTCGTCGGAAATACCTCCTATCAGATCCAAGCAAAGTAGCTTGATGACTCTGATTCTCAGCTGTACAATCGCCGCCGGTGTTCAATTTGGCTGGGCTCTACAGCTTTCCCTTCTGACTCCTTATATTCAGACACTTGGAATAGGGCATGCCTTTTCTTCATTTATTTGGCTTTGTGGTCCTATTACAGGTCTTGTGGTTCAACCATGTGTTGGAATTTGGAGTGACAAGTGCTCTTCAAAATATGGAAGAAGACGCCCATTTATTCTAGCTGGATCCCTAATGATCTCAGTTGCTGTGGTATTAATTGGGTTTTCAGCTGACATTGGGTATATATTAGGGGATACAAAAGAGGACTGCAGAAAATTTAAAGGTACTCGTACAATGGGAGCTTTTGTGTTTATTCTTGGGTTCTGGCTGTTAGATCTCGCCAACAATACAGTACAGGGACCAGCTCGTGCTCTTCTAGCTGATCTATCAGGCCCTGATCAACGCAACTCAGCAAATGCGGTCTTTTGTTCGTGGATGGCCTTCGGCAACATCCTAGGATTTTCTGCTGGAGCTAGTGGAAATTGGCACAGATGGTTTCCTTTTGTGTTGAGTAGAGCTTGCTGTGAAGCTTGTGGAAATCTTAAAGCAGCGTTCATTGTGGCAGTGGTTTTCCTGTGTTTATGTACTCTTGTGACTCTATACTTTGCTGATGAAGTGCCATTCACCGCCAATCACCCTCACCGCTTGTCAGATTCTGCTCCCTTGTTGAATGATCATTCGCAAAATGATCTGCACCATTCAAAACCAGGAACTGATGTGGAATTTATTGACAATGTCAATGGAAAGTTAATTGAAAATGGCAATGAAAGGGATGCAAATTTAAATCATGTCAAACCAAAAATCAGGGAAGTTCCAACTGAAAGTTATACCGATGGCCCTGGAGCAGTTATGGTCAAATTGCTGACCAGTTTAAGACATCTACCTCCTGCTATGCATTCAGTTCTTATTGTTATGGCTCTTAGCTGGCTATCATGGTTTCCCTTCTTTCTTTTTGATACCGATTGGATGGGAAGAGAAGTTTATCATGGTGACCCAACAGGCAATGCAGCTAATGTACAATCTTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTCCTCGCCATCAGTTCTTTCCTTATAGAACCAATGTGTCAGCGGATGGGAGCAAGACTTGTCTGGGCAATAAGTAATTTTATAGTATTTGCCTGTATGGCAGGAACTGCCATCATAACTTTAATATCCGTTGGGCTACATTCTAAAGGGATAGAACATGTTATTGGAGCGAATGAAACTATCAAAATTGCTTCTTTGGTTGTATTTTCTCTTCTCGGCTTTCCTCTTGCTATTACCTATAGTGTTCCCTTTTCTATAACGGCAGAGCTGACTGCTGATAGTGGTGGCGGGCAAGGACTGGCTATTGGAGTTTTGAATCTTGCAATTGTTGTACCACAGATGATTGTATCACTTGGTGCGGGGCCCTGGGATGCATTATTCGGTGGAGGAAATATTCCGGCCTTTGTTTTGGCTTCCTTGAGTGCTCTTGCAGCTGGAATTATCGCAATTCTCAAATTGCCTGATATATCTAGTAATTCTCTGAAGCCATCTGGTTTTCATTTTGGCTAA 1836 42.81 MAGNADSMSIKVPYRNLKEAEVEMVDVDDLHHRQNEQNSNSPSFSSRVSNGSPDLSSEIPPIRSKQSSLMTLILSCTIAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMISVAVVLIGFSADIGYILGDTKEDCRKFKGTRTMGAFVFILGFWLLDLANNTVQGPARALLADLSGPDQRNSANAVFCSWMAFGNILGFSAGASGNWHRWFPFVLSRACCEACGNLKAAFIVAVVFLCLCTLVTLYFADEVPFTANHPHRLSDSAPLLNDHSQNDLHHSKPGTDVEFIDNVNGKLIENGNERDANLNHVKPKIREVPTESYTDGPGAVMVKLLTSLRHLPPAMHSVLIVMALSWLSWFPFFLFDTDWMGREVYHGDPTGNAANVQSYDQGVREGAFGLLLNSVVLAISSFLIEPMCQRMGARLVWAISNFIVFACMAGTAIITLISVGLHSKGIEHVIGANETIKIASLVVFSLLGFPLAITYSVPFSITAELTADSGGGQGLAIGVLNLAIVVPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAAGIIAILKLPDISSNSLKPSGFHFG 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2956879 2963354 + Conep06aG0061600.1 Cone6ag0603 439487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0603 611 SUPERFAMILY MFS general substrate transporter 49 598 IPR036259 -
Cone6ag0603 611 Pfam Major Facilitator Superfamily 79 533 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone6ag0603 611 PANTHER SUGAR TRANSPORTER 65 592 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cone6ag0603 611 FunFam Sucrose transporter SUC2 70 294 - -
Cone6ag0603 611 CDD MFS_SLC45_SUC 72 593 - -
Cone6ag0603 611 Gene3D MFS general substrate transporter like domains 64 595 IPR036259 -
Cone6ag0603 611 MobiDBLite consensus disorder prediction 34 61 - -
Cone6ag0603 611 FunFam Sucrose transport protein SUT5 383 603 - -
Cone6ag0603 611 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0693 Cone-Chr20:4349018 Cone6ag0603 Cone-Chr6:2956879 6.42E-141 dispersed
Cone4ag1269 Cone-Chr4:10438174 Cone6ag0603 Cone-Chr6:2956879 9.92E-151 dispersed
Cone6ag0603 Cone-Chr6:2956879 Cone9ag0608 Cone-Chr9:2869636 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0603 K15378 - mdm:103402916 920.228