Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0663 ATGAATATGATTGTTATGAAGAGGCAGATGATTGAAGATATAGCAATAATAAGTGGATTGGTAGGGGTGCAGTTTGTATATGCAGGAAATTCTTTGTTGCTTAGTTATCTCATGTCCTTAGGCCTCAAGCCTCTCACCATTGTTATCTTCTCTACCTTTGCCACTTTTCTCATTGTCTCTCCCATTGCTATTTATTTTGAAAGGAGTAAATGGCCAAAGAAATTCAGTCCGAAGTTGATTTGTCAGTTGGTTTTGATTGCTTTTGGAGGGGTGACTTTGTTCCAGACGTTGTTCTTAAAGGGGATAGAGCTAACTTCACCAGCAATGGCTACAGCCATGCCTAACATTGCTCCTGGCCTCATCTTTGTCATTGCCTGGACTTTTAGATTGGAGAAAGTGAAACTGAATTGCGTGTATAGCAAGATCAAGATATTGGGCACATTGCTATGCGTAGTAGGTGCTCTAGTAATGAGCATAATGCATAGCACTACAACTGCTAGAGCAGCAGTACAACAACCAGCTCAACTTTCATTATCTCCTTCAATTCCCGTCCCCGAATCAATCTTTGACCGTCAGAAGATTTTCGGTTGCTTATACCTCATGGCCGCCGTCTTCGTGTTGTCTAGCAACATCGTCTTGCAGGCGACGACATTGCGTGATTTTCCGGCGCCTATGTCGTCATGTGCAATCACGTCGTTGATTGGTGTGTTCTTGACGGCTGCCGTGGAGCTTATTCAAGATCATACAATAGAACTCGGTTGGCCTATTGTTAGCGTTAGACATTTGGTTGGCTTTTCTTTACTGGGAGGAATAGTGAGTGGAGCATGTATGAGCTTCAATAACTGGGCAATCAAGAAGAGAGGGCCAGTCTTGGTCTCCATGTTTAGCCCGATCGGAACTGTATGTGCAGTTGTTCTCTCTGTTATCACAATGGGAGACACTATCAACATTGGAAGCCTTGCCGGAATGTTCCTCATGTTTACCGGACTGTACTTTGTGCTCTGGGCAAAGGGGAAGGAAGATTTTCCAGATGAGGATGGATTTGAAGAAGAATTTGATGGAAAGAAGCCTCTTTTAAGTTGA 1083 43.4 MNMIVMKRQMIEDIAIISGLVGVQFVYAGNSLLLSYLMSLGLKPLTIVIFSTFATFLIVSPIAIYFERSKWPKKFSPKLICQLVLIAFGGVTLFQTLFLKGIELTSPAMATAMPNIAPGLIFVIAWTFRLEKVKLNCVYSKIKILGTLLCVVGALVMSIMHSTTTARAAVQQPAQLSLSPSIPVPESIFDRQKIFGCLYLMAAVFVLSSNIVLQATTLRDFPAPMSSCAITSLIGVFLTAAVELIQDHTIELGWPIVSVRHLVGFSLLGGIVSGACMSFNNWAIKKRGPVLVSMFSPIGTVCAVVLSVITMGDTINIGSLAGMFLMFTGLYFVLWAKGKEDFPDEDGFEEEFDGKKPLLS 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3377621 3379316 + Conep06aG0068500.1 Cone6ag0663 439547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0663 360 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020(InterPro)
Cone6ag0663 360 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020(InterPro)
Cone6ag0663 360 PANTHER WAT1-RELATED PROTEIN 21 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone6ag0663 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 159 - -
Cone6ag0663 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0663 Cone-Chr6:3377621 Cone9ag1116 Cone-Chr9:7336197 5.05E-35 dispersed
Cone6ag0663 Cone-Chr6:3377621 Cone6ag0664 Cone-Chr6:3379819 1.38E-168 tandem
Cone6ag0663 Cone-Chr6:3377621 Cone9ag0671 Cone-Chr9:3201512 1.68E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0663 - - - 0.0