Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0720 ATGGAGGGAAGGGAAGGTGGAATAAGCAGTGGGGTTACAGTGGTGGGATCAGATGCTCCGTCGGACTACCATGTCGCTCCGAGGACCGAATACCCGGTCCAGACAGCCGGATCAACGTCGCCGCTGCATCCGGGAGCGCTAGTGATTGCACCACCAACGTCGGCGGTGTCCACGGTGCCGGGAAAGAAGAAGAGAGGAAGACCGAGAAAGTATGGACCTGACGGCCCAGTTAAATCAGCCCTGTCTCCCAAGCCCATATCGTCCTCCGTGCCTCCGCCCATGATCGACTTCTCGGCCCAGAAGCGAGGAAAAATCCGGCCGGCGAGCTCAGTGAGTAAAACCAAGTATGAAGTGGAGAACTTAGGTGAATGGGTTGCTTGTTCTGTTGGTGCTAATTTCACCCCTCATATCATCAATGTCAATGCTGGAGAGGATGTTACAATGAAGATCATATCTTTTTCTCAACAAGGCCATCGAGCCATATGCATACTCTCAGCCAATGGCGTCATCTCAAGCGTCACTCTCCGTCAACCCGATTCGTCTGGAGGAACATTGACTTACGAGGGCCGTTTTGAAATATTATCCTTATCCGGGTCATTCATGCCAAGCGATAGTGGTGAAACTAGGAGCCGGTCCGGTGGAATGAGCGTCTCTTTAGCGAGCCCAGATGGACGAGTAGTAGGTGGTGGAGTAGCCGGTCTTTTAGTCGCTGCAAGTCCAATACAGATTGTGGTGGGCAGTTTTCTGTCCGGAAACCAACACGAGCAGAAACCGAAGAAACAGAAGCATGACATCATATCTACAACTGCCACGCCAACTGCTGCTGTTCCGATTTCAACTGCTGATCCCAAGTTCAGTATTACAACTTCGTCATCTTTCCGAGGGGATAGTTGGTCTTCATTGCCTCTGGATTCCAAGAGTAACCCAACTGATATTAATGTATCTTTACCCGCCGGTTAA 960 51.04 MEGREGGISSGVTVVGSDAPSDYHVAPRTEYPVQTAGSTSPLHPGALVIAPPTSAVSTVPGKKKRGRPRKYGPDGPVKSALSPKPISSSVPPPMIDFSAQKRGKIRPASSVSKTKYEVENLGEWVACSVGANFTPHIINVNAGEDVTMKIISFSQQGHRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGETRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPIQIVVGSFLSGNQHEQKPKKQKHDIISTTATPTAAVPISTADPKFSITTSSSFRGDSWSSLPLDSKSNPTDINVSLPAG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3625087 3628015 - Conep06aG0074200.1 Cone6ag0720 439604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0720 319 MobiDBLite consensus disorder prediction 286 319 - -
Cone6ag0720 319 Gene3D - 135 269 - -
Cone6ag0720 319 ProSiteProfiles PPC domain profile profile. 130 269 IPR005175 -
Cone6ag0720 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 253 - -
Cone6ag0720 319 FunFam AT-hook motif nuclear-localized protein 1-like 135 265 - -
Cone6ag0720 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 248 IPR005175 -
Cone6ag0720 319 MobiDBLite consensus disorder prediction 1 92 - -
Cone6ag0720 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 298 IPR039605 GO:0003680(InterPro)
Cone6ag0720 319 CDD DUF296 134 225 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0350 Cone-Chr14:1623455 Cone6ag0720 Cone-Chr6:3625087 3.41E-59 dispersed
Cone15ag0383 Cone-Chr15:1761417 Cone6ag0720 Cone-Chr6:3625087 2.15E-58 dispersed
Cone3ag0678 Cone-Chr3:3456206 Cone6ag0720 Cone-Chr6:3625087 2.38E-39 dispersed
Cone6ag0720 Cone-Chr6:3625087 Cone8ag0357 Cone-Chr8:2067946 1.68E-170 dispersed
Cone15ag0865 Cone-Chr15:6575646 Cone6ag0720 Cone-Chr6:3625087 2.25E-91 transposed
Cone14ag0306 Cone-Chr14:1406920 Cone6ag0720 Cone-Chr6:3625087 2.04E-88 wgd
Cone14ag0141 Cone-Chr14:683830 Cone6ag0720 Cone-Chr6:3625087 1.06E-21 wgd
Cone15ag0149 Cone-Chr15:720428 Cone6ag0720 Cone-Chr6:3625087 2.71E-21 wgd
Cone18ag1132 Cone-Chr18:8173667 Cone6ag0720 Cone-Chr6:3625087 3.94E-21 wgd
Cone6ag0720 Cone-Chr6:3625087 Cone9ag0724 Cone-Chr9:3455326 5.99E-215 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0720 - - - 0.0