Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0728 ATGGTAATCGTCTCTCACAAACAGTTCCTCAAGATCTTCGCCCTCACCGTCTTCTTCTGCTTCTCCGTCGTCTGTGGCAACACCTCTCCCCGCTACCAACCTGTGTCATTTAACCAAGCCGTAGGCGAAACGATGCCGTTTTTCACCGCGATGTTCGCTTTTCTTATTACTTTTAAGAAAGAGTCCGTACGGGTTTGCCTCTCGCATTTACCTGTCGTTTTGGGAATCGTTGTAGCGACCAACAGCGAGCCGTCGTTTCATCTTCTAGGGTTTCCTGTTCTGATCGGGATCGACGGCTGGGATAGCGTTGAAATCGGTGGTGCAGGGGATTCTGCTGAGGTCGGAGGTCGAGAAGCTTCACTCAATGAATCTGTTACTCCACATGGCTCCGATCGCTGCGTTGATTCTGTTTCCCCTTTCGCTTTACATCGAAGGGAACGTCGCAGCGATCACGGTTCAGAAAACGAGGGAAGATCTCTCAATCGCGGTGCTGTGCTCGGAAATGCTAAGGCCGCCGTTGCGGCGTCGGTTTCCGTACTGATCTTTAGGAATCCAGTAACGGTGACAGGCGTTGTAGAGTTTTCTGTGACGATGACGGTCGGCGTGGTGCTTCACAGTGAGGCTAGAAAGAGGTCCAAGATTGCTGCGAGCCATTAA 657 51.6 MVIVSHKQFLKIFALTVFFCFSVVCGNTSPRYQPVSFNQAVGETMPFFTAMFAFLITFKKESVRVCLSHLPVVLGIVVATNSEPSFHLLGFPVLIGIDGWDSVEIGGAGDSAEVGGREASLNESVTPHGSDRCVDSVSPFALHRRERRSDHGSENEGRSLNRGAVLGNAKAAVAASVSVLIFRNPVTVTGVVEFSVTMTVGVVLHSEARKRSKIAASH 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3672437 3673276 - Conep06aG0075000.1 Cone6ag0728 439612

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0728 218 Pfam Triose-phosphate Transporter family 5 91 IPR004853 -
Cone6ag0728 218 PANTHER SOLUTE CARRIER FAMILY 35 9 91 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0728 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0728 Cone-Chr6:3672437 Cone11ag1170 Cone-Chr11:8930992 1.18E-36 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g447 Blo02g01075 Blo03g00182 . . Bpe05g00613 Bpe07g00138 . . . . . . . . . . . . . . . . . . Cla10g00316 Cam10g0331 Cec10g0344 Cco10g0336 Clacu10g0327 Cmu10g1167 Cre10g0577 . . Cone6ag0728 . Lsi07g01365 Csa05g00353 Chy09g01154 Cme06g02650 . . . . . . Bma05g00793 Bma12g00114 . . . . . Car06g00661 . . . Bhi12g00349 . . Lac11g2183 Hepe06g1188 . . Cla01g00331 Cam01g0343 Cec01g0339 Cco01g0351 Clacu01g0347 Cmu01g0327 Cre09g2183 Lsi09g00353 Csa03g00339 Chy06g01986 Cme09g01686
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0053944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1