Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0745 | ATGGAGATTTTCAACATATCATCCGACCAGTTCCAAGTCGGGTCCTCATCCGCACCCATTTACGAATCATCCTCAACATCCTACCCTCCTAGAAGCACCGTTGCTGCTGCCACAGCTGACTGGAGATCATCCCATTCCGACGAGGAGGTTATACTAGCCTCTAGCCGGCCGAAAAAGAGAGCAGGGAGGAGAGTATTCAAGGAGACAAGGCACCCAGTTTATAGAGGTGTCAGGAGAAGGAACAACAACAAATGGGTTTGTGAATTACGAGAACCGAACAAGAAGACTCGGATTTGGCTCGGGACTTACCCAACTGCTGAGATGGCGGCTCGGGCACATGACGTGGCGGCGTTGGCTTTTCGAGGGAAGTCTGCTTGTCTGAATTTTGCTGACTCAGCCTGGAGTTTGCCGGTCCCGGTCTCTATGGATGCTAAGGATATCAGGGTGGCGGCTGCTAAGGCGGCACAGGAGTTTCGGGGTGAGGAAGTACGTGGCAATGACATGGCGGAGACAGTTGTGGACGAGCGGGAAAATTCAGGTTCAGGTGATATTGGGTTCAGTGATTTGGATGAAGAGGCTGTGTTTAATATGCCAACGTTGCTTTCCAGCATGGCCGAAGGGCTCCTGCTTTCTCCACCACGTTTTAGTCCAGATGAAAGTTTAAATTTGGATGACGTGGAAAAAGGTGATGACTTGTCGCTTTGGAGCTTCGCTATTTGA | 720 | 50.69 | MEIFNISSDQFQVGSSSAPIYESSSTSYPPRSTVAAATADWRSSHSDEEVILASSRPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALAFRGKSACLNFADSAWSLPVPVSMDAKDIRVAAAKAAQEFRGEEVRGNDMAETVVDERENSGSGDIGFSDLDEEAVFNMPTLLSSMAEGLLLSPPRFSPDESLNLDDVEKGDDLSLWSFAI | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3780101 | 3780820 | - | Conep06aG0076800.1 | Cone6ag0745 | 439629 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0745 | 239 | SUPERFAMILY | DNA-binding domain | 73 | 132 | IPR016177 | GO:0003677(InterPro) | |
Cone6ag0745 | 239 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 130 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | SMART | rav1_2 | 73 | 136 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | Gene3D | AP2/ERF domain | 73 | 131 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | PRINTS | Ethylene responsive element binding protein signature | 74 | 85 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | Pfam | AP2 domain | 72 | 122 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 38 | 237 | IPR045277 | GO:0003700(InterPro) | |
Cone6ag0745 | 239 | CDD | AP2 | 74 | 132 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0745 | 239 | FunFam | Ethylene-responsive transcription factor 2 | 72 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag0745 | Cone-Chr6:3780101 | Cone9ag0750 | Cone-Chr9:3581215 | 2.22E-111 | dispersed | |
Cone6ag0745 | Cone-Chr6:3780101 | Cone6ag0746 | Cone-Chr6:3787184 | 2.91E-122 | tandem | |
Cone14ag0113 | Cone-Chr14:525640 | Cone6ag0745 | Cone-Chr6:3780101 | 4.45E-80 | wgd | |
Cone15ag0118 | Cone-Chr15:569337 | Cone6ag0745 | Cone-Chr6:3780101 | 5.88E-76 | wgd | |
Cone6ag0745 | Cone-Chr6:3780101 | Cone9ag0749 | Cone-Chr9:3572793 | 1.64E-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46324 | PF08241 | Methyltransf_11 | 1.10E-18 | CL0063 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0745 | - | - | - | 0.0 |