Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0746 | ATGGAGATTTTCAACCAGTCATCTGACCTGTTACCTGTCGGGTTCTCATCCTCCCCCATTTCCGAATCATCCTCAATATCCTTCGCTACTAGCAGCACCATCGCCGGCGCAGCTGGCCGCAGATTATCCCATTCCGACGAGGACGTTATACTAGCATCTAGCCGTCCCAAAAAGCGAGCAGGGAGGAGAGTATTCAAGGAGACAAGGCACCCAGTTTATAGAGGTGTTAGGAGAAGGAACAACAACAAATGGGTTTGTGAATTACGAGAACCGAACAAGAAGACTCGGATTTGGCTCGGGACTTATCCGACTGCTGAGATGGCGGCTCGGGCACATGACGTGGCGGCACTGGCTTTTCGGGGGAAGTTTGCTTGTCTGAATTTTGCTGATTCAGCTTGGAGTTTGCCGGTCCCCGTCTCTGGGGATGCTAAGGATATTAGGATGGCGGCTGCTAAGGCGGCAGAGGAGTTTCGGGATGAGGAATCTGGTGGCAATGATGTGGCAGCGACAGTTGTGGATGAGGGGGAAAACTCAGGTTCAGGTGATGGGCTCTATTACATGGATGAAGAGGCTGTGTTTGATATGCCAAGGTTGCTTTCCAGTATGGCAGAAGGGCTACTGCTTTCTCCACCACGTTTTAGTACGGAGGAAAGTGTATGCTTCGCTGACGTGGAATATGATGCTGACGTGTCGCTGTGGAGCTTCTCTATTTGA | 714 | 51.12 | MEIFNQSSDLLPVGFSSSPISESSSISFATSSTIAGAAGRRLSHSDEDVILASSRPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALAFRGKFACLNFADSAWSLPVPVSGDAKDIRMAAAKAAEEFRDEESGGNDVAATVVDEGENSGSGDGLYYMDEEAVFDMPRLLSSMAEGLLLSPPRFSTEESVCFADVEYDADVSLWSFSI | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3787184 | 3787897 | - | Conep06aG0076900.1 | Cone6ag0746 | 439630 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0746 | 237 | FunFam | Ethylene-responsive transcription factor 2 | 71 | 130 | - | - | |
Cone6ag0746 | 237 | CDD | AP2 | 73 | 131 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | ProSiteProfiles | AP2/ERF domain profile. | 72 | 129 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | SUPERFAMILY | DNA-binding domain | 72 | 131 | IPR016177 | GO:0003677(InterPro) | |
Cone6ag0746 | 237 | PRINTS | Ethylene responsive element binding protein signature | 95 | 111 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | PRINTS | Ethylene responsive element binding protein signature | 73 | 84 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | Gene3D | AP2/ERF domain | 72 | 130 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | SMART | rav1_2 | 72 | 135 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | Pfam | AP2 domain | 71 | 121 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag0746 | 237 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 31 | 235 | IPR045277 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0848 | Cone-Chr5:3637109 | Cone6ag0746 | Cone-Chr6:3787184 | 9.41E-81 | dispersed | |
Cone6ag0746 | Cone-Chr6:3787184 | Cone9ag0750 | Cone-Chr9:3581215 | 3.94E-116 | dispersed | |
Cone6ag0745 | Cone-Chr6:3780101 | Cone6ag0746 | Cone-Chr6:3787184 | 2.91E-122 | tandem | |
Cone6ag0746 | Cone-Chr6:3787184 | Cone6ag0747 | Cone-Chr6:3789018 | 3.17E-25 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46325 | PF03330 | DPBB_1 | 1.40E-23 | CL0199 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0746 | - | - | - | 0.0 |