Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0752 ATGAGGATATCCCAGAGTGAGACTGCCAGTTCAAGAAGATTTGAGGTTGAGGACAGTGACGAACATGAGTTTTCTGCCTCAGAAGAGGAAGAAGAAATAGAACGTCAGCTTGCCGATGTGACATTCGAAGACTTGCAGAAAGCTCGCTCTGATGGGACCCATACTGTCTACCGAAAACATGATCAGGAGAAGAAAGGTGGACGTGCAAACAAGAATAGGCCGATGGAGGTTAGTAGTAAGAAACCTGTTAGTAGGTTCAGAGAGGTGATTCAGGCTCCTAAAAGGGTGATGCGCGATCCGCGCTTTGAAACTTTATGTGGATCACTTGATGTCGATGGTTTCAGGAAGAGATACGATTTTCTTTTTGAGAATGATCTTCCTGCTGAAAAAGAGGAACTGAGGAAGAAATTAAAGAAGTGCAATAATCTCAAAGAAATTGAAGAACTGAAGGGACACATTTCTTGGATTGAAAAACTGTTGAAATCTGAATCGGTCAAGCGTACTGATGCAACAATTTTAGCTAAGCATAAGAAGAAAGAGAGAGAAGCAGCAAAACAGGGAAAGAAACCCTTCTATCTCAAGAAGTCTGAAATCCGAAAGCAAAGGCTTATTGAGAAATACGAGTCTCTCAAGGCGGCGGGCAAGCTAGATGCATTTATGGAGAAAAGAAGAAAGAAGAATGCTACGAAGGACCACAGATACATGCCATATCGCAAGTCTAACAATGCTAGTCGGCTGGAAGACTGA 747 42.57 MRISQSETASSRRFEVEDSDEHEFSASEEEEEIERQLADVTFEDLQKARSDGTHTVYRKHDQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKRVMRDPRFETLCGSLDVDGFRKRYDFLFENDLPAEKEELRKKLKKCNNLKEIEELKGHISWIEKLLKSESVKRTDATILAKHKKKEREAAKQGKKPFYLKKSEIRKQRLIEKYESLKAAGKLDAFMEKRRKKNATKDHRYMPYRKSNNASRLED 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3817061 3819377 + Conep06aG0077500.1 Cone6ag0752 439636

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0752 248 MobiDBLite consensus disorder prediction 222 248 - -
Cone6ag0752 248 Coils Coil 193 213 - -
Cone6ag0752 248 MobiDBLite consensus disorder prediction 49 84 - -
Cone6ag0752 248 MobiDBLite consensus disorder prediction 21 35 - -
Cone6ag0752 248 PANTHER UNCHARACTERIZED 10 242 IPR009292 GO:0000462(PANTHER)|GO:0005730(PANTHER)|GO:0030686(PANTHER)
Cone6ag0752 248 MobiDBLite consensus disorder prediction 233 248 - -
Cone6ag0752 248 Pfam rRNA biogenesis protein RRP36 68 233 IPR009292 -
Cone6ag0752 248 Coils Coil 130 150 - -
Cone6ag0752 248 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0752 K14795 - - vvi:100246112 316.62
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0752 Cone-Chr6:3817061 Cone9ag0755 Cone-Chr9:3610605 3.90E-146 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g397 . . . . . . . . . . . Cma15g01411 . Car15g01273 . . . . . . . . . . . . . . . . . . . Cone6ag0752 Cone9ag0755 . . . . . . . . . . . . . . Cmo15g01487 . . . . . . Bhi12g00530 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007775 2 2 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 2 1 1 1 1 2 1 1 0 0 1 2 1 32