Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0759 ATGGAAGTGGCTTCGAAGTTCTTTGCGTTAGCTTGCTTACGGAATGAAAGCAGGACGAATTTATCTCCACGGCCACACTATCCCTCCATGCTCAGGTATCCGAAAGGTTTCTCACCTCTGGAGCAGAGTGTCGATGGATCTGAGACGAAAGCTGAGTTCTCCGTCATCGGAATGAGCTGCTCTGCTTGTGCTGGATCTGTGGAGAAGGGGATTAAGAGGCTTCCAGGAATACGTGAGGCTGTGGTTGATGTTTTGAATAACAGAGCTCAAGTCATCTTCTATCCCACCTTCGTTAATGAAGAGACTATTCGCGAGACTATCGAAAATGTTGGATTTGAAGCTACCCTGATAAAAGATGAGACAAATGAGAAACCCACACACATATGCCGGATACGCATAATTGGAATGACTTGCACTACTTGTTCCTCGGCTGTGGAATCAGCCCTGCAAGCAATTCAAGGTGTACAGAAGGCCCAAGTGGCCTTAGCAACAGAAGAAGCAGAAGTTCATTATGATCCAAAAATTCTGAGCAAAATCCTGGAAGCCATAGAGGAAACTGGATTTGAAGCCATTCTTCTAAGTACAGGAGAAGACATAAGCAAAATAGAGCTTAAAGTCGATGGCTTAGAGACCGAGGATTCTAATAAAATATTAGAAGATTCTCTTGGGGCCCTTCTAGGAGTTCAAGATATTGATATTTCCACAGAATTCAACAAGATTTCCCTTTCCTACAGACCAGATATGACCGGACCCAGAACTCTTATCAGAGAAATTGAATCAGCTGGACCCTTCAAGGCAGTGATATTTCCAGGCGGTGGAGGTGGAGAAAGAGAAAACCATAGACACGAGGAAATTAAGCAATATTTTAAATCTTTTCTATGGAGCTTGGTTTTTACAATTCCCGTGTTTCTAACCTCTATGGTTTTTATGTATATTCCTGGAATTAAGCATAGATTGGAAACAAAAGTAGTCAACATGCTGGATATCGGAATGATTTTGAGGTGGATACTGTCCTCTCCAGTTCAATTCGTCATAGGCAGGCGATTTTACACGGGAGCATACAAAGCATTATGCCATGGTTCTGCTAATATGGACGTTTTGATTGCCTTGGGAACAAATGCAGCTTACTTCTTTTCAGCCTACTTAGTGTTGAGATCTGCTTTCTCCCCAGATTTCAAGGGTACAGATTTCTTCGAGACTAGCTCAATGCTTATTTCATTTATCCTGCTTGGAAAATATCTGGAGGTTTTAGCCAAGGCAAAGACCTCTGAGGCTATTGCTAAGCTAATGGACCTGGCACCCGAGACAGCAACCTTGTTAACTCTGGATAGTGAAGGAAATGTGATAAGTGAGGAGGAGATTGACAGTAGATTAATAGAAAAGAATGACGTGATAAAGATTATTCCTGGAGCGAAAATAGCTTCAGATGGGTTTGTTTCATGGGGACAGAGCCATGTAAATGAGAGCATGATAACAGGAGAAGCACGGCCAGTTGCAAAAAGGAAGGGAGATGCAGTGATTGGAGGCACAATGAATGAGAATGGAGTGTTGCATGTCAAGGCAACTCGTGTTGGTCCCGAGAGTGCTCTTTCACAAATTGTTCGACTAGTTGAGTCAGCCCAAATGGCTAAAGCCCCTGTGCAGAAGTTTGCTGATCGCATATCCAAATTTTTTGTGCCTCTGGTCATTTTACTAGCTTTTATGACTTGGCTATCATGGTTTTTAGCTGGGAAGTACAATGGCTACCCAAAATCTTGGATCCCATCTTCCATGGATAGCTTTGAGCTTGCCCTTCAGTTTGGGATATCTGTCGTTGTCATAGCTTGCCCTTGTGCTCTTGGCTTGGCTACCCCTACGGCTGTCATGGTTGGTACGGGAGTAGGTGCCTCTCAAGGTGTACTCATCAAAGGAGGTCAAGCTTTAGAAAGTGCACATAAGGTGAACTGCATCGTATTTGATAAGACTGGAACTCTCACAATAGGGAAGCCAGTGGTTGTCAATAGTCGTCTCTTAAATAAAATGTCACCTCAAGAATTCTATGAACTCGTTGCTGCAACTGAGGTGAACAGTGAGCATCCAGTAGCCAAGGCCCTTGTTGAGCATGCAAAGAAGTTCAGCGAAGACGAAGAGAACCCAGTCTGGCCAGAAGCAAAGGACTTCATTTCTATTACTGGTCATGGAGTGAAGGCCACAGTTCATGACAAGGAAATTATAGTAGGAAACAAGAGCTTAATGACAAACCACAATGTCATCATTCCTGTAGATGCTGATGAAATGCTCACAGAAGCTGAAGATATGGCTCAAACCGGGATCTTGGTAGCTATAGATAGGCAATTGGTTGGAGTTCTGGCCATTTCTGATCCACTAAAACCAGCAGCAGAAGAAGTCATTTCCATTCTCAAGTCAATGAATGTGAGAAGCATCATGGTAACAGGTGACAACTGGGGTACTGCCAATTCCATTGCCAAGGAAGTGGGAATCGAAACCGTTATAGCAGAAGCCAAACCCGAGCACAAGGCAGAGAAAGTAAAGGACTTACAGGCTTCAGGTCTCACTGTGGCAATGGTGGGAGATGGAATCAACGATTCTCCAGCCCTTGTGGCAGCGGATGTAGGAATGGCAATTGGTGCTGGAACAGACATAGCTATAGAGGCAGCTGATATTGTCCTTATGAGAAGCAACTTGGAGGATGTTATAACTGCCATAGACCTTTCTAGAAAGACCTTTTCGAGAATACGTCTCAACTACATCTGGGCCGTGGGTTATAACCTTCTCGGGATTCCTATCGCTGCTGGGGCTCTCTTCCCATCAACCGGATTCAGATTACCACCATGGATTGCTGGAGCTGCAATGGCGGCTTCTTCTGTAAGTGTTGTTTGTTGCTCTCTTTTGTTGAAGAATTACAGGAGACCCAAGAAGCTTGACAATCTTATGATTCGTGGGATAGTGGTCCAATGA 2958 44.05 MEVASKFFALACLRNESRTNLSPRPHYPSMLRYPKGFSPLEQSVDGSETKAEFSVIGMSCSACAGSVEKGIKRLPGIREAVVDVLNNRAQVIFYPTFVNEETIRETIENVGFEATLIKDETNEKPTHICRIRIIGMTCTTCSSAVESALQAIQGVQKAQVALATEEAEVHYDPKILSKILEAIEETGFEAILLSTGEDISKIELKVDGLETEDSNKILEDSLGALLGVQDIDISTEFNKISLSYRPDMTGPRTLIREIESAGPFKAVIFPGGGGGERENHRHEEIKQYFKSFLWSLVFTIPVFLTSMVFMYIPGIKHRLETKVVNMLDIGMILRWILSSPVQFVIGRRFYTGAYKALCHGSANMDVLIALGTNAAYFFSAYLVLRSAFSPDFKGTDFFETSSMLISFILLGKYLEVLAKAKTSEAIAKLMDLAPETATLLTLDSEGNVISEEEIDSRLIEKNDVIKIIPGAKIASDGFVSWGQSHVNESMITGEARPVAKRKGDAVIGGTMNENGVLHVKATRVGPESALSQIVRLVESAQMAKAPVQKFADRISKFFVPLVILLAFMTWLSWFLAGKYNGYPKSWIPSSMDSFELALQFGISVVVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVNSRLLNKMSPQEFYELVAATEVNSEHPVAKALVEHAKKFSEDEENPVWPEAKDFISITGHGVKATVHDKEIIVGNKSLMTNHNVIIPVDADEMLTEAEDMAQTGILVAIDRQLVGVLAISDPLKPAAEEVISILKSMNVRSIMVTGDNWGTANSIAKEVGIETVIAEAKPEHKAEKVKDLQASGLTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMRSNLEDVITAIDLSRKTFSRIRLNYIWAVGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKNYRRPKKLDNLMIRGIVVQ 985
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3867984 3871909 - Conep06aG0078200.1 Cone6ag0759 439643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0759 985 SFLD Haloacid Dehalogenase 633 908 - -
Cone6ag0759 985 Gene3D - 126 192 - -
Cone6ag0759 985 Pfam Heavy-metal-associated domain 131 189 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 Pfam Heavy-metal-associated domain 53 113 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 SUPERFAMILY HMA, heavy metal-associated domain 126 196 IPR036163 GO:0046872(InterPro)
Cone6ag0759 985 Pfam haloacid dehalogenase-like hydrolase 648 870 - -
Cone6ag0759 985 FunFam Copper-transporting ATPase 1, putative 419 541 - -
Cone6ag0759 985 NCBIfam HAD-IC family P-type ATPase 404 939 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone6ag0759 985 ProSiteProfiles Heavy-metal-associated domain profile. 49 115 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 FunFam Copper-transporting ATPase HMA5 48 119 - -
Cone6ag0759 985 SUPERFAMILY Calcium ATPase, transduction domain A 451 537 IPR008250 -
Cone6ag0759 985 SUPERFAMILY HAD-like 650 962 IPR036412 -
Cone6ag0759 985 ProSiteProfiles Heavy-metal-associated domain profile. 127 191 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 FunFam Probable copper-transporting ATPase HMA5 763 913 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase 1 signature 151 172 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase 1 signature 105 125 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase 1 signature 50 75 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase 1 signature 76 99 - -
Cone6ag0759 985 Gene3D - 195 268 - -
Cone6ag0759 985 Pfam E1-E2 ATPase 432 629 - -
Cone6ag0759 985 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872(InterPro)
Cone6ag0759 985 SUPERFAMILY HMA, heavy metal-associated domain 195 262 IPR036163 GO:0046872(InterPro)
Cone6ag0759 985 CDD HMA 131 190 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 803 813 - -
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 651 665 - -
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 781 792 - -
Cone6ag0759 985 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Cone6ag0759 985 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 6 982 - -
Cone6ag0759 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 399 924 IPR023298 -
Cone6ag0759 985 Gene3D - 418 541 - -
Cone6ag0759 985 NCBIfam heavy metal translocating P-type ATPase 364 965 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone6ag0759 985 CDD HMA 52 115 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 Gene3D - 619 913 IPR023214 -
Cone6ag0759 985 FunFam ATPase copper transporting beta 122 195 - -
Cone6ag0759 985 CDD P-type_ATPase_Cu-like 290 967 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase signature 349 368 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase signature 560 574 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase signature 833 850 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase signature 421 439 - -
Cone6ag0759 985 PRINTS Copper-transporting ATPase signature 401 420 - -
Cone6ag0759 985 SFLD p-type atpase 633 908 IPR044492 -
Cone6ag0759 985 Gene3D - 737 787 IPR023299 GO:0000166(InterPro)
Cone6ag0759 985 Gene3D - 658 736 IPR023299 GO:0000166(InterPro)
Cone6ag0759 985 ProSitePatterns Heavy-metal-associated domain. 55 84 IPR017969 GO:0046872(InterPro)
Cone6ag0759 985 ProSiteProfiles Heavy-metal-associated domain profile. 200 266 IPR006121 GO:0046872(InterPro)
Cone6ag0759 985 Gene3D - 45 117 - -
Cone6ag0759 985 SUPERFAMILY HMA, heavy metal-associated domain 46 120 IPR036163 GO:0046872(InterPro)
Cone6ag0759 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 653 659 IPR018303 -
Cone6ag0759 985 NCBIfam copper ion binding protein 131 190 IPR006122 GO:0005507(InterPro)
Cone6ag0759 985 NCBIfam copper ion binding protein 50 114 IPR006122 GO:0005507(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0313 Cone-Chr12:1713702 Cone6ag0759 Cone-Chr6:3867984 0 dispersed
Cone1ag0440 Cone-Chr1:3956128 Cone6ag0759 Cone-Chr6:3867984 0 dispersed
Cone6ag0759 Cone-Chr6:3867984 Cone8ag0313 Cone-Chr8:1804426 0 dispersed
Cone6ag0759 Cone-Chr6:3867984 Cone9ag0775 Cone-Chr9:3710036 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0759 K17686 - vvi:100259857 1561.2