Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0785 | ATGGAGGGTAAGGAAGAAGATGTGAAGCTTGGAGCAAATAAGTTTTCAGAGAGGCAGCCAATTGGAACATCTGCTCAGACAGACAAGGATTACAAGGAGGCACCACCTGCGCCATTGTTTGAGCCAGGTGAGCTCACTTCATGGTCGTTCTACAGAGCAGGAATTGCAGAGTTTGTAGCCACATTCTTGTTCCTCTACATCACCATCTTGACTGTGATGGGAGTTAACAAAGCTCCGTCCAAGTGTGCTTCTGTTGGTATTCAAGGCATCGCTTGGGCTTTTGGTGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGGTGGACACATAAACCCAGCAGTGACATTTGGTCTGTTCTTGGCAAGGAAACTGTCCCTTACAAGGGCTGTCTTCTACATAATCATGCAGTGCCTTGGAGCCATATGTGGAGCTGGTGTTGTTAAGGGGTTTGAAGGGTCAATCTACGAGCAGAAACTTGGTGGGGCCAACTTTGTAAACCATGGTTACACAAAGGGTGATGGCCTTGGTGCTGAAATTGTAGGCACCTTTGTTCTCGTCTACACTGTCTTCTCTGCAACTGATGCGAAGAGAAACGCCAGAGACTCACATGTCCCTATATTGGCTCCTCTTCCGATTGGGTTTGCAGTATTCTTGGTCCACTTGGCCACCATTCCTATCACGGGAACTGGCATCAATCCTGCTAGGAGTCTCGGAGCTGCAATCATCTACAACAGGGACCATGCTTGGGATGACCAATGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCTGTTTATCACCAGCTTGTCATCAGAGCCATTCCATTCAAGGCCAGAGCTTAA | 861 | 48.43 | MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEAPPAPLFEPGELTSWSFYRAGIAEFVATFLFLYITILTVMGVNKAPSKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFEGSIYEQKLGGANFVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDQWIFWVGPFIGAALAAVYHQLVIRAIPFKARA | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4000558 | 4002159 | + | Conep06aG0080800.1 | Cone6ag0785 | 439669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0785 | 286 | Pfam | Major intrinsic protein | 44 | 273 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 282 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Cone6ag0785 | 286 | Gene3D | Glycerol uptake facilitator protein. | 37 | 284 | IPR023271 | - | |
Cone6ag0785 | 286 | NCBIfam | MIP family channel protein | 56 | 272 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | ProSitePatterns | MIP family signature. | 112 | 120 | IPR022357 | - | |
Cone6ag0785 | 286 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 52 | 71 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 94 | 118 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 131 | 150 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 216 | 238 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 180 | 198 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | PRINTS | Major intrinsic protein family signature | 256 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone6ag0785 | 286 | SUPERFAMILY | Aquaporin-like | 44 | 278 | IPR023271 | - | |
Cone6ag0785 | 286 | FunFam | Probable aquaporin PIP1-2 | 37 | 286 | - | - | |
Cone6ag0785 | 286 | CDD | MIP | 52 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1227 | Cone-Chr1:56019949 | Cone6ag0785 | Cone-Chr6:4000558 | 4.31E-175 | dispersed | |
Cone5ag0214 | Cone-Chr5:905811 | Cone6ag0785 | Cone-Chr6:4000558 | 1.44E-173 | dispersed | |
Cone6ag0785 | Cone-Chr6:4000558 | Cone8ag1291 | Cone-Chr8:10585800 | 2.87E-135 | dispersed | |
Cone6ag0785 | Cone-Chr6:4000558 | Cone8ag0296 | Cone-Chr8:1713588 | 1.15E-196 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0785 | K09872 | - | csv:101217440 | 543.888 |