Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0812 | ATGGAAGGCTCATCGTGGGATTTGCAAGCTATAGTAAGAGGATCATACACCAATGAAACTGACCATGATTCATTAATTAGTAATGATATGATCAAAATGGAATCACCGCAGCTACCAGCGTCCGTCTTTGATCAATACCCTAATTCAGTCAGTACTTTTCTTGATCATGATGAATATGCAAGTTTTGCGGATTTCTTTCAAACCGCCACAACAAGTTTAGATGAATTGGAGGGGCTTTACAAGCCTTTCTATCCGGTATTATCGCAACCGATCTTTTCCTCTCAGACCGTCAGTTTTACTGATCCGGCCTCCATTTCTGCTCCTAGAGAATTAGTCAAGGAACCGGATGATCATCCTCCAAAGCATGCGCAGCACCACAAAAACCAGCAAACATCATCATCTGCTAAGACCAAAACAAGCAAGAAGAATCAACAAAATAGGGTGATGAAACAGGTGAAAGCAGATGGGCTGAGCTCAGACATGTGGGCTTGGAGGAAATACGGGCAGAAACCTATAAAGGGATCGCCATATCCGAGAAGCTATTATAGATGTAGTAGCTCAAAGGGATGTTCAGCAAGAAAGCAAGTGGAACAAAGCCCTTCCGATCCAGACATTTTCATCATAACCTACATGTCGGAACACGACCATGCCCTCCCGACTCGCCGGAACTCACTTGCTGGAATCAGCAAGAGCAAGTACTCCTCGCCCAAACCTAAAATCACTACTTGTGATCACGACCAGGCCGTCAATAGTATTATCGGTTCGCCAAATCCCAATAATTATAAGGTTATGTCTCCTACTACATCTCAATCTGTAGTAACTTATGAAGACCAAGATCTCAGGCATGTTAATAATATGTGCGTAAAAAAGGAAGGAGAGTATTATGAGGCAATGTTCACGGAACAAAGTGACGGTAATTGCGGCCAATGCGCGATGGGTAGTTCCGATGATTGTGATAATCATCAGATCATTTCGAGTGACGATTTGTTTCCAAGCCTGGAAGAGCTACTTTTTGGATAG | 1020 | 43.14 | MEGSSWDLQAIVRGSYTNETDHDSLISNDMIKMESPQLPASVFDQYPNSVSTFLDHDEYASFADFFQTATTSLDELEGLYKPFYPVLSQPIFSSQTVSFTDPASISAPRELVKEPDDHPPKHAQHHKNQQTSSSAKTKTSKKNQQNRVMKQVKADGLSSDMWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVEQSPSDPDIFIITYMSEHDHALPTRRNSLAGISKSKYSSPKPKITTCDHDQAVNSIIGSPNPNNYKVMSPTTSQSVVTYEDQDLRHVNNMCVKKEGEYYEAMFTEQSDGNCGQCAMGSSDDCDNHQIISSDDLFPSLEELLFG | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4127490 | 4128756 | + | Conep06aG0083600.1 | Cone6ag0812 | 439696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0812 | 339 | Gene3D | WRKY domain | 141 | 212 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0812 | 339 | ProSiteProfiles | WRKY domain profile. | 153 | 219 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0812 | 339 | SMART | WRKY_cls | 158 | 218 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0812 | 339 | MobiDBLite | consensus disorder prediction | 126 | 152 | - | - | |
Cone6ag0812 | 339 | SUPERFAMILY | WRKY DNA-binding domain | 156 | 219 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0812 | 339 | Pfam | WRKY DNA -binding domain | 160 | 216 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0812 | 339 | FunFam | WRKY transcription factor 22 | 141 | 212 | - | - | |
Cone6ag0812 | 339 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 6 | 334 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone6ag0812 | 339 | MobiDBLite | consensus disorder prediction | 111 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag0812 | Cone-Chr6:4127490 | Cone6ag1143 | Cone-Chr6:8641222 | 8.32E-33 | dispersed | |
Cone11ag0447 | Cone-Chr11:2253478 | Cone6ag0812 | Cone-Chr6:4127490 | 1.75E-39 | wgd | |
Cone14ag0387 | Cone-Chr14:1810039 | Cone6ag0812 | Cone-Chr6:4127490 | 7.43E-43 | wgd | |
Cone14ag0050 | Cone-Chr14:312009 | Cone6ag0812 | Cone-Chr6:4127490 | 1.07E-39 | wgd | |
Cone15ag0424 | Cone-Chr15:2001244 | Cone6ag0812 | Cone-Chr6:4127490 | 4.73E-37 | wgd | |
Cone15ag0055 | Cone-Chr15:335860 | Cone6ag0812 | Cone-Chr6:4127490 | 1.32E-40 | wgd | |
Cone18ag1061 | Cone-Chr18:7777622 | Cone6ag0812 | Cone-Chr6:4127490 | 2.30E-41 | wgd | |
Cone6ag0812 | Cone-Chr6:4127490 | Cone9ag0811 | Cone-Chr9:3902804 | 3.99E-193 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46334 | PF06650 | SHR-BD | 1.00E-10 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0812 | K13426 | - | vvi:100251862 | 203.371 |