Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0813 ATGGAACGAGACAATACTGATATCCCACTTCCATCAAATTCATTAACGCAAGAAGTAGCTCATGATCATCGTCTTCTTGCTTCGGCCAATAGTGACAATATTGATTGGTTGAGCCTTCTTTCTTCTTCCTTCAACTATGGTACTTATCAGCAACTACCATCATTGATTGCAGGAAGCTGTAGTAGTTATCAATATCAGTCAATAATGGCTAGAAATGGAGGTGATTATGATCACGATCACGATCACGATCACGATCACGATCATCAAGTATCAAATATTGGGAATGATGATCATAGAAACAGATACATAAGAAGGGGCAGGAAAGTTACTCCTCCAAGGGTAGCTTTTCACACGAGGAGCGCTGATGACATTCTGGATGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTAAAGAATAGTAGACATCCAAGGAGTTATTACCGCTGTACGCATCATACATGCAACGTAAAGAAACAGATCCAGCGGCTGGCAAATGATTCAAGTATAGTGGTGACAACCTACGAAGGGATACACAACCACCCCTGTGAGAAATTAATGGAGACCTTAACCCCACTGCTAAAGCAATTGCAATTCCTCTCTGGTATTTAG 615 40.98 MERDNTDIPLPSNSLTQEVAHDHRLLASANSDNIDWLSLLSSSFNYGTYQQLPSLIAGSCSSYQYQSIMARNGGDYDHDHDHDHDHDHQVSNIGNDDHRNRYIRRGRKVTPPRVAFHTRSADDILDDGYRWRKYGQKAVKNSRHPRSYYRCTHHTCNVKKQIQRLANDSSIVVTTYEGIHNHPCEKLMETLTPLLKQLQFLSGI 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4129505 4130226 + Conep06aG0083700.1 Cone6ag0813 439697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0813 204 FunFam WRKY transcription factor 57 111 185 - -
Cone6ag0813 204 Pfam WRKY DNA -binding domain 126 183 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag0813 204 SUPERFAMILY WRKY DNA-binding domain 118 184 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag0813 204 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 83 183 IPR044810 GO:0003700(InterPro)
Cone6ag0813 204 SMART WRKY_cls 125 184 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag0813 204 ProSiteProfiles WRKY domain profile. 120 185 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag0813 204 Gene3D WRKY domain 110 184 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag0813 204 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag1003 Cone-Chr16:9799442 Cone6ag0813 Cone-Chr6:4129505 4.40E-37 dispersed
Cone2ag0036 Cone-Chr2:196168 Cone6ag0813 Cone-Chr6:4129505 1.47E-38 dispersed
Cone6ag0813 Cone-Chr6:4129505 Cone9ag1265 Cone-Chr9:9395529 6.17E-32 dispersed
Cone14ag0389 Cone-Chr14:1820231 Cone6ag0813 Cone-Chr6:4129505 3.61E-53 wgd
Cone15ag0427 Cone-Chr15:2010547 Cone6ag0813 Cone-Chr6:4129505 2.19E-52 wgd
Cone6ag0813 Cone-Chr6:4129505 Cone9ag0812 Cone-Chr9:3904808 4.19E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46335 PF07714 PK_Tyr_Ser-Thr 5.00E-47 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0813 - - - 0.0