Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0825 ATGGCTGGGAATTCAACAGCAGCGGGTGCCTGTCCAGCACCCATGAAAGCTACATCAAACGGCGCGTTTCAAGGAGACAATCCCCTTGATTATGCACTCCCTCTTATCATCTTACAGATTTGCCTTGTCGTCGTTCTCACACGTGTTCTAGCTTTCTTTCTCCGGCCGCTGAGACAGCCTCGTGTCATTGCTGAGATTGTTGGAGGTATATTGCTAGGCCCCTCAGCTCTAGGCCGGAACAAAACCTTCCTAAACAACGTTTTCCCGTCAAGAAGTCTAACAGTACTAGACACTCTAGCTAATCTGGGCCTCCTCTTCTTCCTCTTCCTAGTCGGGCTTGAACTGGACCTCAGTTCCCTCCGAAGAACCGGGAAAAAGGCCCTCAGCATAGCCGCAGCTGGAATCAGCCTCCCGTTCCTTATGGGAATCGGAACCTCTTATGTTTTACGAGCAACGATTTCAAAAGGTGTAGACAAAGCCCCATTCCTTGTTTTCATGGGTGTTGCTCTTTCCATAACTGCGTTCCCTGTCCTGGCCCGCATCTTAGCCGAGCTCAAGCTCCTAACAACCGACATAGGCCGGATGGCCATGTCAGCAGCGGCGGTTAATGACGTGGCCGCTTGGATCCTACTCGCTCTGGCTATCGCCTTATCCGGGAAGGACAGCTCTCCGCTTATTTCTCTCTGGGTCTTCTTGTGTGGAGCTGGGTTCGTGACCGCTTGCTTCTTTGTTTTCCCCCCCATGTTTAAATGGATGGCTCACCAGTGCCCGGAGGGTGAGCCGGTCAAGGAGCTGTATGTCTGTGCCATCTTGACTATGGTTCTGGCGGCTGGGTTCGTTACGGACACAATTGGGATTCACGCGTTGTTTGGGGCTTTTGTGGTGGGAGTGCTTGTACCGAAAGAAGGGCCGTTTGCTGGAGCATTGGTTGAGAAAGTTGAGGATCTTGTTTCAGGGCTTTTCCTTCCTTTGTACTTTGTTTCTAGCGGGCTTAAAACCGATGTGACCACCATTAAAGGGGCCCAATCTTGGGGTCTTCTTGTCCTCGTCATTGGTACAGCTTGTTTTGGGAAAATTGCCGGGACTGTCTCTGTTTCTCTTCTCTGTAAAGTGCCCTCTCAAGAGGCCATTGCTCTTGGGTTTCTGATGAATACTAAAGGGTTGGTAGAACTGATTGTCCTCAACATTGGTAAAGACAGAAAGGTGTTGAATGATCAAACATTTGCAATCATGGTTTTAATGGCGATATTCACGACGTTCATCACAACACCTTTAGTGATGGCTGTCTATAAGCCAGCTAAAAGAAGGAACGAAGTGTCTGATTACAAGCGCAGAACGATCGAGCAGAGAGAATCTAAATCCCATCTTCGTATCGTGGCATGTTTCCACACTATAAGAAACATCCCCGCCATGGTCAATCTGATTGAAGCTTCTCGTGGGACAGGGAAGAAAGAAGGTCTATGTGTCTACGCAATGCACTTAATGGAGCTAACAGAAAGACCCTCTGCCATCTTAATGGTCCACAAGGCGAGAAAAAACGGACTTCCCTTTTGGAATAAAGGGCCCAGAGATGCTTCCGACCAATTTGTTGTTGGTTTTGAGGCCTTTTTACAGCTCAGCAGAGTTTCAATCCGACCAATGACAGCCATTTCATCAATGTCTGATATGCATGAAGATATCTGCAATAGTGCGGAGGGAAAAAGAGCTACTGTGATAATCCTTCCGTTCCATAAACATCAGAGACTGGACGGGACTTTGGAAACTACTCGCGCTGAGTTCCGTTTGGTCAACAAGAAGGTTCTAGAACATGCTAGATGTTCGGTTGGAATCTTGGTTGACCGTGGACTCGGAGGTGGGATCCATGTCTCTGCAAGCAATGTTTCTTCGACTGTAACTGTGTTGTTCTTTGGTGGAAGAGATGATAGGGAAGCGCTTGCTTATGGTGCAAGAATGGCGGAGCATCCAGGTATAAAACTAATTGTGGTTAGGTTCTTGACGGGCCCGGATAAGATATCAGAATCAGCAGAGATTGTGAAAGAGAATAGCAATTTGGATCAGGACAAGAAGTTCTTGTCTGAATACAAGCAGGGGATTTTGAAGGACGAGTCTATTCGGTTCGAGGAGAGGAGGGTGAGCACTGGCACGGAAGTTGCTGAGGCGGTTAAGGAGTTTAGCAAGTGCAATTTGATATTGGCGGGAAGGATGCCAGAAAGTCAAGTGGTTGAAGAGCTGATGTATAGTCATCATCATGTGAAGGGGGAGTGTCCCGAGCTCGGGCCGATAGGGAACCTGTTGACTTCTCATGATCTAGTGATTTCTGCATCTGTATTGATCTTGCAACAGTTTCATTATCAGGAGATTCCGCGTTCTGTTTCGGGCTTGTCCAGGTCGGTCGTGTTGCCTAAGGAAGATCTCGAAGCGAGCTTATGA 2430 48.11 MAGNSTAAGACPAPMKATSNGAFQGDNPLDYALPLIILQICLVVVLTRVLAFFLRPLRQPRVIAEIVGGILLGPSALGRNKTFLNNVFPSRSLTVLDTLANLGLLFFLFLVGLELDLSSLRRTGKKALSIAAAGISLPFLMGIGTSYVLRATISKGVDKAPFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWILLALAIALSGKDSSPLISLWVFLCGAGFVTACFFVFPPMFKWMAHQCPEGEPVKELYVCAILTMVLAAGFVTDTIGIHALFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTDVTTIKGAQSWGLLVLVIGTACFGKIAGTVSVSLLCKVPSQEAIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVMAVYKPAKRRNEVSDYKRRTIEQRESKSHLRIVACFHTIRNIPAMVNLIEASRGTGKKEGLCVYAMHLMELTERPSAILMVHKARKNGLPFWNKGPRDASDQFVVGFEAFLQLSRVSIRPMTAISSMSDMHEDICNSAEGKRATVIILPFHKHQRLDGTLETTRAEFRLVNKKVLEHARCSVGILVDRGLGGGIHVSASNVSSTVTVLFFGGRDDREALAYGARMAEHPGIKLIVVRFLTGPDKISESAEIVKENSNLDQDKKFLSEYKQGILKDESIRFEERRVSTGTEVAEAVKEFSKCNLILAGRMPESQVVEELMYSHHHVKGECPELGPIGNLLTSHDLVISASVLILQQFHYQEIPRSVSGLSRSVVLPKEDLEASL 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4213906 4216509 - Conep06aG0084900.1 Cone6ag0825 439709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0825 809 Gene3D - 35 440 IPR038770 -
Cone6ag0825 809 FunFam Cation/H(+) antiporter 15 35 437 - -
Cone6ag0825 809 Gene3D - 490 748 - -
Cone6ag0825 809 PANTHER CATION/H + ANTIPORTER 11 785 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cone6ag0825 809 Pfam Sodium/hydrogen exchanger family 47 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0681 Cone-Chr15:3668569 Cone6ag0825 Cone-Chr6:4213906 1.91E-49 dispersed
Cone6ag0825 Cone-Chr6:4213906 Cone9ag0826 Cone-Chr9:4014052 0 dispersed
Cone6ag0824 Cone-Chr6:4210873 Cone6ag0825 Cone-Chr6:4213906 1.36E-40 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0825 K26731 - mdm:103447323 1092.03