Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0840 ATGGAGGAGGGGACTAAATTTCGGTTAGTTCGCTGCCCGAAATGTGCAGAGCTCTTGCCGGAGAATCCTGAATTCTCCGTTTATCAGTGTGGTGGTTGCGGTGCTATTCTCCGAGCAAAGATGAAAGTTGCTGTGAATGATGGGTTTATGGAGAGATCAGATGATGAGAAAAGTAGGGGGAGCTTTGAGAAGTTGGAGGTTTTGTCTGAGAAAGGAGGTAGTAGTAGTATGTTAAATTCTGCTTCTGAGACTGAAGGGGAAAGGGAGAGTCTTAGGGTGGATCCGAGCAATAGAAACAACAGAGTTTTCGGAGAAAGAATGGTTAATCCTAATAGCGTTCGATCAAGAACAAGGAGAAAAGAAGTTTTTGATGAATACAAGATGAAACGTGAGGAAGAAATCATTAAAGCCTCAAGGTTTGAACCAAATGGTAGTAGAAAAGATACTAGGTTCATTGATAATCCGGTTCATAGGTATAATCTTGATAAGAACATGTATTCAAGGAATTCTGTTGATTCAAACATGGAGAGGTATCTTGGATTTTATGGAAACTCCATGGAAGTTTCTGGTCCGAGGAGATTTCCTAGTACTTATTACGATGAGGGGCCTTCGAACTATAACAGCCCGGATCCGTTATATGGCAGCCATGGTGGTTCCATGGGAATGAAGACCTTAGAAAATTTGGAACGCGATCAAGCTGAGCTCCTTAAGAAGTTGGATGAGTTGCAAAATCAACTTAGTAGGTCTGGTCTGGATAAAGAAACAGTCATTCCCAATATGCCCCTACATAATGTTTCAAGGCATCCTTACTTTTCTGAACCACATGGAACTGTTCCTATAACGAGTCATCATCATCACGATACTCCTAATTTCTATCCTTCTCCGAGCCATGTTCGAAACAAAGTACCGGATTATTATTACAATCCATTTCATCCAATGACGAGGGGCCCACATTATGAACAGATTCATCCATATTCATCACAATCCCAACATGACTTCTTTCCAAGACGGCACAGGGATGTAAATCCACGCCCTCCTGTTCCTTTTAGGAATAGAAGAATGGTTACAGAGGAGGACCCTGTCAATTCCAATTTATACCGAAATGCAAATCCAGTTATGTTTGAACCATCTAGTTTTCATCCACAAGCTGTGTATTCTCCTTCTCTGTCTAGAGATAAACAGCAGCATACTAGATGGCCAAGTGATCTTGATTCAGACATCGGTGGGTTTGGTCTGGTCAGATCAGAAAGGGATGTGGTAAAGCATACAAAGGTGCAATTCTGTCATGCTGTAGTCGGTGGGGCCCCATTTATAGTTTGCAATAAGTGCTTTGAGTTGCTGAAACTGCCAAGAAAGCTTTTCAGGGTGGTGAAGAATCAGCAAAAACTGCAGTGTGGTGGTTGTTCAGCTTTCATTCTTGTTATAATTGAGAATAGGAAGCTTATTATTAGCATTCCTACTGAACATGAAGATTCTCCTAGTGAAAGTTCGTATAATAGGACAGAAGAATGGGGATCAAATGTAATTGAATCTGAGAAGAGAAAGAAGAATGGTCTTAATTCCTCTACTGAGGATGAGGGAAATCCAGCTGGCCCTGCTCCTTCCAGGCAATATAGTGACGGTTATCCTAATAGTGCAGTTAGTAGATATGGTAAGGGAAATGAGAATTCTGAATCAGACCTAGATGATAAGGTGATCCTTAAACAGGTTACCTATCAGGATAATTATGTAAAAGATATGTCGGCTGCTACTGAGATGGATGTTTCTTTTGATGAATATACAAATCGGCAATTTTCCCAGGACTCTATTGAGGCAAGTAAAGAAGAATATCATAACAAGACCTATAACGAGGATGGAGAACCCTTCCGTGTAGGTCTTGTTGAGAAAAAAAACTGTGAGGATTTCTCAAGATCTAATCAGAGTGAAGAAGATGATGGACCTCAGAAGGAGAAAGAAAAAGGTAAAGGGAAGGTTTTTGTCAATGGAAACCTCTTGCCTTATGATGTAATTAAAGAGGCTGAAAAGCTAGCGGGCCCAATTCTTCCCGGAGATTACTGGTACGATTTCCATGCTGGATTCTGGGGTGTGATGGGCCATCCATGTCTTGGCATAATTCCTATTGTGCGGCTGGAAATACCGGAGTGTATATAA 2151 41.19 MEEGTKFRLVRCPKCAELLPENPEFSVYQCGGCGAILRAKMKVAVNDGFMERSDDEKSRGSFEKLEVLSEKGGSSSMLNSASETEGERESLRVDPSNRNNRVFGERMVNPNSVRSRTRRKEVFDEYKMKREEEIIKASRFEPNGSRKDTRFIDNPVHRYNLDKNMYSRNSVDSNMERYLGFYGNSMEVSGPRRFPSTYYDEGPSNYNSPDPLYGSHGGSMGMKTLENLERDQAELLKKLDELQNQLSRSGLDKETVIPNMPLHNVSRHPYFSEPHGTVPITSHHHHDTPNFYPSPSHVRNKVPDYYYNPFHPMTRGPHYEQIHPYSSQSQHDFFPRRHRDVNPRPPVPFRNRRMVTEEDPVNSNLYRNANPVMFEPSSFHPQAVYSPSLSRDKQQHTRWPSDLDSDIGGFGLVRSERDVVKHTKVQFCHAVVGGAPFIVCNKCFELLKLPRKLFRVVKNQQKLQCGGCSAFILVIIENRKLIISIPTEHEDSPSESSYNRTEEWGSNVIESEKRKKNGLNSSTEDEGNPAGPAPSRQYSDGYPNSAVSRYGKGNENSESDLDDKVILKQVTYQDNYVKDMSAATEMDVSFDEYTNRQFSQDSIEASKEEYHNKTYNEDGEPFRVGLVEKKNCEDFSRSNQSEEDDGPQKEKEKGKGKVFVNGNLLPYDVIKEAEKLAGPILPGDYWYDFHAGFWGVMGHPCLGIIPIVRLEIPECI 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4294414 4297714 + Conep06aG0086600.1 Cone6ag0840 439724

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0840 716 MobiDBLite consensus disorder prediction 634 655 - -
Cone6ag0840 716 Coils Coil 225 245 - -
Cone6ag0840 716 MobiDBLite consensus disorder prediction 488 561 - -
Cone6ag0840 716 MobiDBLite consensus disorder prediction 538 554 - -
Cone6ag0840 716 MobiDBLite consensus disorder prediction 68 101 - -
Cone6ag0840 716 MobiDBLite consensus disorder prediction 506 521 - -
Cone6ag0840 716 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 697 IPR040244 GO:1900150(InterPro)
Cone6ag0840 716 Pfam Probable zinc-ribbon domain 433 473 IPR021480 -
Cone6ag0840 716 Pfam Enhanced disease resistance 4-like, N-terminal domain 6 38 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0840 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0480 Cone-Chr11:2435981 Cone6ag0840 Cone-Chr6:4294414 2.85E-71 wgd
Cone18ag1029 Cone-Chr18:7592004 Cone6ag0840 Cone-Chr6:4294414 8.66E-73 wgd
Cone6ag0840 Cone-Chr6:4294414 Cone9ag0837 Cone-Chr9:4105125 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g110 Blo02g01141 . . . Bpe05g00682 . . . Cmo06g01054 . . . . . . Cpe14g00471 . . . . . . . . Cla07g01414 Cam07g1515 Cec07g1611 Cco07g1571 Clacu07g1503 Cmu07g1473 Cre07g1850 . . Cone6ag0840 Cone9ag0837 . . . Cme07g01579 . . . . . . Bma05g00858 . . . . . Cma16g00555 Car06g00867 . . . . . . . . . . . . . . . . . . Csa04g00643 Chy07g01167 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004376 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 5 1 43