Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0879 ATGGTGAAGGCAAGATTAAGCTATTGGTTGAATCTCTCTGTATTGCTTCTGGTCTTGCTTAAAGCAGCACAAGGTTTCAATGTCGGAATTACTTATGTTCAAAGCGCAGTTGCCAAAGGAGCTGTTTGTTTGGACGGAAGCCCGCCGGCTTACCATTTTGACAAAGGATTTGGTGCTGGAATCAACAATTGGTTAGTTCACATTGAGGGTGGAGGATGGTGCAACAATGTCACGACTTGCCTTGCCCGACAGAACACTCGTTTAGGCTCATCAAAACAAATGTCAAAAGTAGTTGCTTTCTCCGGCCTTTTGAGCAACAAGCCACAATTCAATCCAGATTTTTACAATTGGAATAGAATCAAGGTTAGGTACTGTGATGGATCTTCTTTCACGGGCGATGTAGAGGCCATCAATCCCGCTACAAATCTCCACTTCAGAGGAGCCAGAGTTTACCGTGCTATTATCGAGGATTTATTGGCCAAAGGAATGAAAAATGCTCAAAATGCTGTTCTCTCGGGTTGCTCGGCCGGTGGATTGTCTTCTATTCTGCATTGTGATAGCTTCCGAGCTCTCGTGCCTATAAGTGCTAAAGTAAAGTGCTTATCAGATGCTGGATACTTTATAAATGCGAGGGATGTTTCCGGAGCACAACATATTGCAACCATCTACAGTGAAGTAGTAGCAACTCATGGTTCGGCGAAGAATCTGCCTACATCTTGCACTTCAAGAATGAAACCAGAATTGTGCTTCTTTCCGCAAAATGTGGCGCCGACTGTTAGAACCCCACTCTTTCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAACATCCTGGCTCCTGGTGTGGCCGATCCACACGGTACATGGCATAGCTGCAAGCTCGACATTAACAACTGCTCTCCTACTCAACTTCAAACCATGCAAGGTGACCAAAAACTCACATAA 948 44.41 MVKARLSYWLNLSVLLLVLLKAAQGFNVGITYVQSAVAKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLARQNTRLGSSKQMSKVVAFSGLLSNKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAINPATNLHFRGARVYRAIIEDLLAKGMKNAQNAVLSGCSAGGLSSILHCDSFRALVPISAKVKCLSDAGYFINARDVSGAQHIATIYSEVVATHGSAKNLPTSCTSRMKPELCFFPQNVAPTVRTPLFLVNAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQGDQKLT 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4484632 4489493 - Conep06aG0090600.1 Cone6ag0879 439763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0879 315 Pfam Pectinacetylesterase 23 310 IPR004963 GO:0016787(InterPro)
Cone6ag0879 315 PANTHER NOTUM-RELATED 15 310 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0108 Cone-Chr5:497092 Cone6ag0879 Cone-Chr6:4484632 9.68E-121 dispersed
Cone6ag0879 Cone-Chr6:4484632 Cone1ag1586 Cone-Chr1:57518332 1.30E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0879 K19882 - cit:102628021 528.094