Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0884 | ATGGGATCGACTGGAAGCAAACCTTCGACCGCTACGTCGTCGTCGTCTTCTTCTTCTTCTTCTCTGAGGATTCGACACAAAGGCCGTCGGATTTTCCAGTCCTCCTGCCTCGCTTGTTCTTCTAGATCTCATGATAGTGACAATGACGGCGACCAGGTTTGTAGTAACCAGAACAAAGAGAGCGAAGCTTATGCTCCATCTGCAAATCAGACTGGAACAGAGACAGATCAGACGAAGATTGATAATTACAGAGGGGTCAAACTTGACCACCAATCTGTAGAAATCCCATCTTTGTCTTCCAACATTCACCTCAATGAATGGGATCGAGCAAGGGTCCCTAATTCTTCTTCCACCCAAACTGGTTCTAGCTCAGCTCAAGATTCCTCCACTCAATCTTTGAACCCTTCAAGCAATTTTCTTTCCCGCTTTAGTTTTATTCCTGGTAATGTAAGCTTTAGATTAAGTAGAGCTACCAGTTTAGGATCTTCAAGGTCTTTTCCAGTCTCTTCAACAAGCCCCACCTCAATGTTAAACAATGAAGATGAACTTCATTCACATAGACAACCTTCTACTAGTGTTCTTCCTATAGATGAAGCTCTGCCTTCTTCAAATCATTATGGTGGTACTAGTGCTAGTTTTTCTAACATGGCTAGAGAGTGTGATAATAATAATATAAGAGTAGGGTCCGATGTAAATTTATACCCTCCAAGAATCAATGCAGAAAGCAATGAGACTAGATTACCTGATAGGCGGATTGGTGATAGAGAACCAGTTGAACGGATTGTCCGTTTTAGCCGGACATTAAGTGTAGGGAGGCTCCGAGATAGAGTACTTCGTAGATCCTCGTTATCTGACTTTACATTCTGTCCTTTACAACAAGAGAGCGAAGAGAGAGAAGGTGGGAGTCAGATTGATCAGACAAGAGTAGTAGTAGCACCAGAAGAAAATAATAATACTAGTCATAGTAATACTATGACCTCTCCAACTAGATTGGTTTATCCTCCTCCTAGCCTGTCAAACTCCTTGTTTGGCATTCAAGATTATGAGGGGGAAACTAACCAGCCGAGAGAAGCTAGATACCAGGATCTTCATGAGCATAGGTCAAATTTTCTTGAACGAAGAAGAAGGATTAGGTCTCAGGTTCGTGCACTTCAGAGACTGGGAAGTCGATTCGAGAACCTATCTGGGCATGAGAGATCATGCATATTATCTGGTCAACATAGAACAGGTCGTTGTACATGTCGAATTAATACCCGAGATGATAACATAAATGATAATAATGGTGCTAGGGCCAGTATATCAAGAATCGTGATGTTAGCAGAAGCTTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGCGGTTCTAACTGCTCGACCGTCCATTTCTTCGATTGGGTCCCTTCCTGCACCTACTGAAGCTGTGGAATCCTTGCCTGTCAAATTATACTCCAAGTTAAAGAAACACGAGACTGATGAAATCCCACAATGTTATATTTGCCTAGTAGAGTATGAAGAAGGAGACGACATGAGAATACTTCCTTGCCACCATGAATTTCACAGAACATGCGTAGATAAGTGGCTGAAAGAGATTCACAGGGTTTGTCCACTTTGCCGGAGGGATATATGCCGGTCCGAGCCGCTGTCTGTTGAGAACTAG | 1662 | 42.72 | MGSTGSKPSTATSSSSSSSSSLRIRHKGRRIFQSSCLACSSRSHDSDNDGDQVCSNQNKESEAYAPSANQTGTETDQTKIDNYRGVKLDHQSVEIPSLSSNIHLNEWDRARVPNSSSTQTGSSSAQDSSTQSLNPSSNFLSRFSFIPGNVSFRLSRATSLGSSRSFPVSSTSPTSMLNNEDELHSHRQPSTSVLPIDEALPSSNHYGGTSASFSNMARECDNNNIRVGSDVNLYPPRINAESNETRLPDRRIGDREPVERIVRFSRTLSVGRLRDRVLRRSSLSDFTFCPLQQESEEREGGSQIDQTRVVVAPEENNNTSHSNTMTSPTRLVYPPPSLSNSLFGIQDYEGETNQPREARYQDLHEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGRCTCRINTRDDNINDNNGARASISRIVMLAEALFEVLDEIHQQSAVLTARPSISSIGSLPAPTEAVESLPVKLYSKLKKHETDEIPQCYICLVEYEEGDDMRILPCHHEFHRTCVDKWLKEIHRVCPLCRRDICRSEPLSVEN | 553 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4512765 | 4515672 | + | Conep06aG0091100.1 | Cone6ag0884 | 439768 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 161 | 188 | - | - | |
Cone6ag0884 | 553 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 462 | 545 | IPR013083 | - | |
Cone6ag0884 | 553 | SMART | ring_2 | 498 | 539 | IPR001841 | - | |
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 50 | 77 | - | - | |
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 161 | 179 | - | - | |
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - | |
Cone6ag0884 | 553 | FunFam | Putative RING zinc finger domain superfamily protein | 466 | 545 | - | - | |
Cone6ag0884 | 553 | MobiDBLite | consensus disorder prediction | 112 | 134 | - | - | |
Cone6ag0884 | 553 | SUPERFAMILY | RING/U-box | 476 | 545 | - | - | |
Cone6ag0884 | 553 | ProSiteProfiles | Zinc finger RING-type profile. | 498 | 540 | IPR001841 | - | |
Cone6ag0884 | 553 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 552 | - | - | |
Cone6ag0884 | 553 | Pfam | Ring finger domain | 497 | 540 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0264 | Cone-Chr14:1218963 | Cone6ag0884 | Cone-Chr6:4512765 | 7.71E-42 | dispersed | |
Cone15ag0285 | Cone-Chr15:1331820 | Cone6ag0884 | Cone-Chr6:4512765 | 1.82E-36 | dispersed | |
Cone6ag0884 | Cone-Chr6:4512765 | Cone9ag0823 | Cone-Chr9:3982397 | 2.47E-146 | dispersed | |
Cone19ag0136 | Cone-Chr19:730622 | Cone6ag0884 | Cone-Chr6:4512765 | 2.72E-10 | transposed | |
Cone6ag0884 | Cone-Chr6:4512765 | Cone9ag0888 | Cone-Chr9:4333137 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0884 | - | - | - | 0.0 |