Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0908 | ATGTCTAATGAGCTGAGTGACATTTACTATCAAAACCCATTTCAAGCTCAAGGCCATAACAGTCAAGACATGATATCTTCTTCTTCCATGAATGTTTCAGCTGGTTCATCATCATCATCACCACCATATAACAGTCACAACTATCTCCAACCTTTTGATCCTAATTATCACTCATACAGCATGATGATGGGCTTCACCAACTATTTACAATCTGATCCAATGGAGTACTACTGCCACTCCCTCTCAAAATCTTTTGGTCTAACATCTCCTGCTTCCAAACCATTTTCGTCCGTCGATGCAGATCAAGAAGTTGATCATCATCACGATCTTGATTTAAAGCCGCTCCATTCTCATTGTAAGGACGTCCCGGTAAGTACTTTCATGTCTTCCTCTTCTTCTGAAGCTCATGCCGATCAAGAGATCTCGGGTGGGAATAGTACCACTAAGAACGACAACCAACTGAAAGGGGACATATTGGAAGAAGGAGAAGAAAGCTCTAAGAAAGAAAGCAAAGGGGGAAAGAAGAAAGGAGAGAAGAAGCAAAAAGAGGCAAGATTTTCTTTCATGACAAAGAGTGAGGTTGATCATTTAGAAGATGGATATAGATGGAGAAAGTATGGTCAGAAGGCTGTCAAGAATAGCCCTTACCCAAGAAGCTACTACAGGTGCACAAGTCAAAAATGCATGGTGAAGAAACGTGTGGAGAGGTCATTCCAAGATCCAACAATTGTGATCACAACTTATGAAGGCCAACACAACCATCCAATTCCAACAACACTTAGAGGAAATTATAATTATAATTATAATCATAATTTGCCTGATTATTCTGGTATTTTTCAACCTACTAATAATACTACTCTTCTAACACCGCAAGCTGTACCTCTGCAAATGCCGGGTCAAACTTGCATTCCTCCTCTTCCTTCTCCTTATGATCATGATGATGATTACATGATCGATAGCCCTCATCATCATCGCCACAATAATTATCAACCTGATCCTGATCATCATCATCATCATCATTATGGGCTCTTGTATGACCACATAGATTCTTCCATGTTCCTTAAACCTGATCACCCATCAGATCAATGA | 1089 | 39.94 | MSNELSDIYYQNPFQAQGHNSQDMISSSSMNVSAGSSSSSPPYNSHNYLQPFDPNYHSYSMMMGFTNYLQSDPMEYYCHSLSKSFGLTSPASKPFSSVDADQEVDHHHDLDLKPLHSHCKDVPVSTFMSSSSSEAHADQEISGGNSTTKNDNQLKGDILEEGEESSKKESKGGKKKGEKKQKEARFSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCMVKKRVERSFQDPTIVITTYEGQHNHPIPTTLRGNYNYNYNHNLPDYSGIFQPTNNTTLLTPQAVPLQMPGQTCIPPLPSPYDHDDDYMIDSPHHHRHNNYQPDPDHHHHHHYGLLYDHIDSSMFLKPDHPSDQ | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4663736 | 4665107 | - | Conep06aG0093600.1 | Cone6ag0908 | 439792 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0908 | 362 | MobiDBLite | consensus disorder prediction | 318 | 340 | - | - | |
Cone6ag0908 | 362 | SMART | WRKY_cls | 197 | 256 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0908 | 362 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 80 | 263 | IPR044810 | GO:0003700(InterPro) | |
Cone6ag0908 | 362 | MobiDBLite | consensus disorder prediction | 154 | 184 | - | - | |
Cone6ag0908 | 362 | ProSiteProfiles | WRKY domain profile. | 192 | 257 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0908 | 362 | Pfam | WRKY DNA -binding domain | 198 | 255 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0908 | 362 | SUPERFAMILY | WRKY DNA-binding domain | 189 | 257 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0908 | 362 | MobiDBLite | consensus disorder prediction | 123 | 184 | - | - | |
Cone6ag0908 | 362 | Gene3D | WRKY domain | 181 | 258 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone6ag0908 | 362 | MobiDBLite | consensus disorder prediction | 123 | 153 | - | - | |
Cone6ag0908 | 362 | FunFam | WRKY transcription factor 57 | 183 | 257 | - | - | |
Cone6ag0908 | 362 | MobiDBLite | consensus disorder prediction | 19 | 46 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1011 | Cone-Chr20:7094584 | Cone6ag0908 | Cone-Chr6:4663736 | 3.59E-38 | dispersed | |
Cone4ag0098 | Cone-Chr4:473724 | Cone6ag0908 | Cone-Chr6:4663736 | 5.29E-35 | dispersed | |
Cone6ag0541 | Cone-Chr6:2670377 | Cone6ag0908 | Cone-Chr6:4663736 | 1.52E-34 | dispersed | |
Cone6ag0908 | Cone-Chr6:4663736 | Cone9ag0551 | Cone-Chr9:2624393 | 2.08E-33 | dispersed | |
Cone1ag0248 | Cone-Chr1:1653400 | Cone6ag0908 | Cone-Chr6:4663736 | 8.97E-44 | wgd | |
Cone10ag1424 | Cone-Chr10:11017299 | Cone6ag0908 | Cone-Chr6:4663736 | 2.96E-44 | wgd | |
Cone5ag1608 | Cone-Chr5:11290360 | Cone6ag0908 | Cone-Chr6:4663736 | 3.04E-45 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46343 | PF02365 | NAM | 7.30E-38 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0908 | - | - | - | 0.0 |