Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0909 ATGGTCAGTTACGTGCTTGATTTTCAGGAGAGTTACTTATTAAAAAATATTAAAAACCGGGTGGAGAAAGAGGCGGGAAAATCTTATATACTAGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAAGTAGGATTGGCAATAGGTGTTGTGGTGCTATGTATTGGAATTGGTGTAGGAGTAATGCATTTTGTGGAGAGGATTTGGTGGTTGGATTCGGTTTATCTATCGGTTATGTCTGTTACGACGGTTGGGTATGGGGACCGCGCTTTTGTTTCGATGGGGGGTCGTATTTTTGCTTCAATTTGGTTGCTCGTGTCTACGCTTGCTGTTGCTCGGGCATTTCTTTACTTGACTGAGGCGAGAGTGGATAAGAGGCATAGGAAGATGACCAGGACCCCAACACTTCAAGCTGACGTGCTAATGTCTCTCATCATGAAGTGTGCCCCCATGTATGGCCTACATGCATGGGGCCACACCTCTTTGAGAGAGCCGGGCACACCGGCTTGGAGTGCCATGCTGATATTACAGAACCTAGGGGGAAAGTTGAAGTATTAA 558 45.7 MVSYVLDFQESYLLKNIKNRVEKEAGKSYILDVKKGRMRIRMKVGLAIGVVVLCIGIGVGVMHFVERIWWLDSVYLSVMSVTTVGYGDRAFVSMGGRIFASIWLLVSTLAVARAFLYLTEARVDKRHRKMTRTPTLQADVLMSLIMKCAPMYGLHAWGHTSLREPGTPAWSAMLILQNLGGKLKY 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4668373 4669301 - Conep06aG0093700.1 Cone6ag0909 439793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0909 185 SUPERFAMILY Voltage-gated potassium channels 33 135 - -
Cone6ag0909 185 Pfam Ion channel 52 120 IPR013099 -
Cone6ag0909 185 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 33 132 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Cone6ag0909 185 Gene3D - 10 145 - -
Cone6ag0909 185 FunFam Two-pore potassium channel 3 27 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0247 Cone-Chr1:1641684 Cone6ag0909 Cone-Chr6:4668373 3.53E-49 wgd
Cone10ag1423 Cone-Chr10:11013242 Cone6ag0909 Cone-Chr6:4668373 3.37E-28 wgd
Cone5ag1609 Cone-Chr5:11296569 Cone6ag0909 Cone-Chr6:4668373 2.28E-50 wgd
Cone6ag0909 Cone-Chr6:4668373 Cone9ag0915 Cone-Chr9:4502453 2.72E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0909 K05389 - csv:101220017 205.297