Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0928 | ATGTTAGAGGCAATCAAACCTGCCGCTGCTCATGAGGAGGTGATCAATTCTACTACAAGCCTTAACCCTAGGGTTAGAGGAAACGATGAAAACGAGGAGGAGCCTGAGGAGGGAGAGATCGTAGGAGACACTGATTCGACGTCGTCGGCGGTAGGTCGGTCGCTGCATCCTCTGGAATTTTCATGGACCTTCTGGTTCGATAATCCCTCCGTTAGGCCCAAGCAAGCTGCCTGGGGTAGCTCCCTCCGCCCGATCTATACATTCTCCACTGTCGAGGATTTTTGGGGCGTTTACAACAACATTCATCATCCAAGCAAGTTAGCTCTGAAAGCGGATTTGTATTGTTTCAAGCATAATATCGAACCAATATGGGAGGATCCTATTTGTGTGACTGGAGGGAAGTGGACTGTAACCACTATTAGAGGAAAATCTGATACTTATTGGCTATATACGTTGCTTGCAATGATCGGAGAGCAGTTTGATCACGGGGATGAAATTTGTGGGGCTGTTGTTAATGTTAGAAACAAAGAGGACAAAGTTTCTATCTGGACCAGGAATGCTTCTAATGAATCAGCTCAGGTGAGCATTGGGAAACAGTGGAAGGAGTGCCTCGATTATAGTGAAACCATAGGATTTATATTCCACGAGGACGCTATTAAATTGGACAGAAACGCAAAGAGCCGCTACACAACATGA | 696 | 45.98 | MLEAIKPAAAHEEVINSTTSLNPRVRGNDENEEEPEEGEIVGDTDSTSSAVGRSLHPLEFSWTFWFDNPSVRPKQAAWGSSLRPIYTFSTVEDFWGVYNNIHHPSKLALKADLYCFKHNIEPIWEDPICVTGGKWTVTTIRGKSDTYWLYTLLAMIGEQFDHGDEICGAVVNVRNKEDKVSIWTRNASNESAQVSIGKQWKECLDYSETIGFIFHEDAIKLDRNAKSRYTT | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4749111 | 4751457 | + | Conep06aG0095600.1 | Cone6ag0928 | 439812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0928 | 231 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 31 | 220 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Cone6ag0928 | 231 | MobiDBLite | consensus disorder prediction | 13 | 50 | - | - | |
Cone6ag0928 | 231 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 112 | 135 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Cone6ag0928 | 231 | SUPERFAMILY | eIF4e-like | 31 | 226 | IPR023398 | - | |
Cone6ag0928 | 231 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 48 | 231 | IPR023398 | - | |
Cone6ag0928 | 231 | Pfam | Eukaryotic initiation factor 4E | 57 | 209 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone6ag0928 | 231 | FunFam | Eukaryotic translation initiation factor 4E | 47 | 231 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0175 | Cone-Chr14:814931 | Cone6ag0928 | Cone-Chr6:4749111 | 3.76E-67 | dispersed | |
Cone4ag0359 | Cone-Chr4:1630709 | Cone6ag0928 | Cone-Chr6:4749111 | 1.86E-64 | dispersed | |
Cone6ag0928 | Cone-Chr6:4749111 | Cone7ag0345 | Cone-Chr7:1505292 | 1.96E-70 | dispersed | |
Cone19ag0360 | Cone-Chr19:2988873 | Cone6ag0928 | Cone-Chr6:4749111 | 5.18E-36 | transposed | |
Cone6ag0928 | Cone-Chr6:4749111 | Cone9ag0931 | Cone-Chr9:4570020 | 4.90E-148 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0928 | K03259 | - | csv:101206312 | 333.954 |