Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag0940 | ATGACGTCGGGAACGAGAATGCCGACGTGGAAAGAGAGGGAGAACAACAAGAGGAGAGAAAGACGTCGTAGAGCGATCGCGGCGAAGATCTTCGCCGGACTGAGGATGTACGGAAACTACAAGCTTCCCAAGCACTGCGACAACAACGAGGTTCTAAAAGCTCTCTGCAACGAAGCCGGCTGGACAGTGGAAGAAGACGGTACTACCTACAGAAAGGGATGCAAACCATTGGAAAGCATGGACATGGTAGGCGGGTCAGCTTCTGCAAGTCCATGCTCATCATACCAGCCAAGCCCATGTGCATCGCACAATCCAAGTCCTGGCTCATCTTCCTTTCCAAGCCCAACTTCATCTCGATACACCGTTAAAGCCAATAATGGCAACGCCGATCCTAATTCCCTTATCCCATGGCTGAAGAACCTCTCATCAGGCTCATCATCATCATCCTCATCAAAGATGGCCCACCAACTGTACATCCCTGGTTGCTCCATAAGTGCTCCAGTCACTCCTCCTCTAAGCTCTCCAACTGCTCGAAGCCCACGTACCAAGAATGATTGGGATGATCTGACGGCTAGTGCTGCATGGGCCGCACAACACTTCTCTTACCAGCCCTCTTCAACCCCACCAAGCCCAGGCCGTCAGGTTTTTCCTGATCCAGGTTGGCTTTCTGGGATCCGAATACCCCAAAGCGGGCCATCGTCTCCTACATTTAGCCTTGTGTCACGAAATCCGTTTATTTCTAGGGAGGAGGCTCTGTCTGGTGCTGGGTCTAGGATGTGGACCCCGGGACAAAGTGGGACATGTTCTCCTGCTGTCACAGCAGGTCTCGATCAGACAGCTGATGTTCCGATGTCTGATGGGATTGCAACCGAGTTTGCATTTGGTAGCAATACGACAGGTTTGGTCAAGCCATGGGAAGGAGAGAGGATCCATGAGGAATGTGTTTCGGATGATCTTGAACTCACCCTTGGCAGCTCAAGAACTAGATAA | 990 | 51.62 | MTSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPLESMDMVGGSASASPCSSYQPSPCASHNPSPGSSSFPSPTSSRYTVKANNGNADPNSLIPWLKNLSSGSSSSSSSKMAHQLYIPGCSISAPVTPPLSSPTARSPRTKNDWDDLTASAAWAAQHFSYQPSSTPPSPGRQVFPDPGWLSGIRIPQSGPSSPTFSLVSRNPFISREEALSGAGSRMWTPGQSGTCSPAVTAGLDQTADVPMSDGIATEFAFGSNTTGLVKPWEGERIHEECVSDDLELTLGSSRTR | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4839207 | 4841982 | - | Conep06aG0097000.1 | Cone6ag0940 | 439824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag0940 | 329 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone6ag0940 | 329 | MobiDBLite | consensus disorder prediction | 94 | 126 | - | - | |
Cone6ag0940 | 329 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 329 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Cone6ag0940 | 329 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 142 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag0940 | Cone-Chr6:4839207 | Cone7ag1804 | Cone-Chr7:11802434 | 7.21E-54 | dispersed | |
Cone6ag0204 | Cone-Chr6:962545 | Cone6ag0940 | Cone-Chr6:4839207 | 1.51E-130 | transposed | |
Cone6ag0940 | Cone-Chr6:4839207 | Cone9ag0944 | Cone-Chr9:4662970 | 4.24E-220 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46345 | PF01842 | ACT | 6.50E-07 | CL0070 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag0940 | - | - | - | 0.0 |