Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag0991 ATGGAGTCGCGAGTGCTGTCACGCGCATCCCAATTCTCTGCCATTCCACAACTGGGAAAGACGCCTAGGGAGACCAATAGTGTTGGCTTCGTCTCCACCAGGTCGATCGGTGAAGGCGGGAATCTCTTATGGGGGAGGCAGCTCCGGCCATCCCTGCTGCTTGAATACTCTCCGGCGAGGAGCTTAGCCGTCGGAAAGCGGGAGATTCTTAAGCCTTGCCTCGCCGCCGCTTCTTCACCTACCGAAGGTAGCGATTCCGCCGGGGAACCGAAGATCGCCCCGCTTCGCTTCTTAGACAAGTACCCTTTCATTCTCACCGGCTTCTTCTTCTTCCTCTGGTACTTTTTGAACGTGATTTTCAACATTATCAACAAGAAGTTGTACAATTACTTCCCGTATCCCTATTTCGTATCCGTTGTTCATTTAGCAGTTGGAGTTGTTTACTGTTTGGTCAGCTGGACCGTGGGCCTCCCTAAGCGCGCTCCCATTGATTCAAATCTCCTGAAGCTGCTTGTCCCTGTAGCAGTCTGTCATGCATTGGGACATGTCACCAGCAATGTCTCCTTTGCAGCAGTTGCTGTCTCATTCACACATACAATCAAAGCTCTTGAGCCTTTCTTCAATGCTGCTGCTTCTCAATTCTTACTTGGCCAACAAATACCTATAGCCTTATGGCTATCACTTGCTCCTGTTGTTCTTGGTGTGTCGATGGCATCATTGACTGAGCTGTCATTTAACTGGACCGGGTTCATTAGTGCTATGATTTCCAATGTCTCCTTTACTTACAGGAGTATTTATTCAAAGAAAGCAATGACTGATATGGATAGTACCAATCTCTACGCCTACATTTCCATCATTGCTCTTTTTGTCTGTATCCCACCTGCCCTGATTATTGAGGGCCCTCAGCTAATCAAGCATGGGTTTAGTGATGCCATTGCTAAAGTCGGCTTAGTCAAGTTTCTATCAGATCTCTTCTGGGTTGGAATGTTTTACCATCTCTATAATCAGTTGGCTACAAACACACTAGAGAGGGTGGCACCTCTTACACATGCTGTTGGGAATGTGTTGAAACGAGTCTTTGTGATTGGATTCTCAATCCTGATCTTCGGTAACAAAATTTCGACACAAACTGGTATTGGAACGTCCATTGCAATTGCAGGAGTTGCAATCTACTCTTACATCAAGGCCAAGATTGAGGAAGAGAAACGGCAAGGAAAAGCAGCTTGA 1227 46.86 MESRVLSRASQFSAIPQLGKTPRETNSVGFVSTRSIGEGGNLLWGRQLRPSLLLEYSPARSLAVGKREILKPCLAAASSPTEGSDSAGEPKIAPLRFLDKYPFILTGFFFFLWYFLNVIFNIINKKLYNYFPYPYFVSVVHLAVGVVYCLVSWTVGLPKRAPIDSNLLKLLVPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFLLGQQIPIALWLSLAPVVLGVSMASLTELSFNWTGFISAMISNVSFTYRSIYSKKAMTDMDSTNLYAYISIIALFVCIPPALIIEGPQLIKHGFSDAIAKVGLVKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILIFGNKISTQTGIGTSIAIAGVAIYSYIKAKIEEEKRQGKAA 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5437760 5440783 + Conep06aG0103000.1 Cone6ag0991 439875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag0991 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 393 - -
Cone6ag0991 408 PANTHER SOLUTE CARRIER FAMILY 35 95 396 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cone6ag0991 408 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 402 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone6ag0991 408 Pfam Triose-phosphate Transporter family 106 392 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1151 Cone-Chr15:9327612 Cone6ag0991 Cone-Chr6:5437760 6.37E-79 dispersed
Cone6ag0991 Cone-Chr6:5437760 Cone9ag1074 Cone-Chr9:6041529 1.16E-75 dispersed
Cone13ag0910 Cone-Chr13:8001985 Cone6ag0991 Cone-Chr6:5437760 3.35E-184 transposed
Cone6ag0991 Cone-Chr6:5437760 Cone9ag0995 Cone-Chr9:5133765 3.72E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag0991 K15283 - mdm:103446379 687.952