Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1010 | ATGGATCAGGCAGAGGCTAACTCTTGGCTTAGGAGAACTAAATTTTCCCACACAGTTTATCACCGTTGGGATGCTTCTAGGTTGCCTTCCAATACTTTTATGATCGAGCCGTTTATCTTAGAGCACAATTCAGGCTTGAAATCAAGACCAAAACCTTCTTCTTCCTCTGATAAGAAACCAGCTCTTAATAACTCTACCTCTTATCAGAAATCAGCTCTTAATAACTGTCCGCTTCAGCAAAATCACACACTATACAAACAAAGGGCTTCCTCCCCTATTCCTGTTACTATAGTTCCTGATCTATTTAAGGAAGCTCGATCAAATCAGAAGCGGTTCTCAACTCCAGATCCTCAAATAAAAAGAGAAATTTTCAAAGGAATCAAAGGGAAATTGTTCAATACAGAGCCACAAGTGACTGGGGCTATCAAGTCAACATCATCACCAAATACTCGACCCCAAATTGACTTGGGTTCAATGATGAAAGTGTTTGAGAAACCGAAGAATAGGAAGGAGTCGACTTGGACTAAGTATTTTGATTATGGTGGAGGAGGGAGAGTCACTGCTTTGGAAACAAGTAGTGAATGGAATGTTGATCTTTCTAAGCTGTTTCTTGGTCTTCGGTTTGCTCATGGTGCTCATAGTAGGCTTTACCATGGAGTCTACAATGATGAACCAGTTGCTGTTAAAATTATCAGGATTCCAGATGATGACGAAAATGGAGCTATGGAGGTTCGATTGGGGAAGCAATTTTTCAGAGAGGTCACTCTTTTATCTCGGCTTCACCACCCGAATGTCATAAAGTTTGTAGCAGCACGTAGAGAACCACCAGTTTATTGTGTCATAACAGAGTATCTTTCTGGGGGTTCTTTGCGGACTTATATACGAAAGAATGAAAACATATCTCTGTCTCTTCAAAAACTGATTGCTATTGCCTTGGACATTGCACGGGGAATGGAATATATTCACTCCCAGGGTGTCATTCATAGGGACTTGAAACCTGGGAATGTTCTTGTTGATCAAGAAAACCACCTGAAAGTTGCTGATTTTGGTATTGCTTGTGAGGAGGCATATTGTGATCTGGTGGCCGGTGTTCATGGCACCTACCGTTGGATGGCACCTGAGATGATCAAACAGAAATCTTATGGCCGCAAAGTTGACGTTTATAGCTTTGGGCTTATCTTATGGGAGATGTTGGCTGGGAAAATCCCCTATGAAGATATGAATCCTATCCAAGCTGCGTTTGCCGTAATAAGTAAGAATCTTAGACCCATTATCCAGAGCGACTGTCCACCAGCATTGAGAGATCTAATCGATCAATGTTGGGCCCTTCAACCCGAAAAGAGGCCCGAGTTCTGGCAGATTGTGAAGGTGTTAGAGCAGTTCGAGTCTTCACTTGCTCGGGATGGAACATTGAGTCTCATACAGAACCTGACTTGCCAAGATCACAAGAAAGGTCTCCTCCATTGGATTCAAAAGCTTGGTTCTGCGAATTCTCATACTTCACCTAAAATTGCATGA | 1518 | 42.23 | MDQAEANSWLRRTKFSHTVYHRWDASRLPSNTFMIEPFILEHNSGLKSRPKPSSSSDKKPALNNSTSYQKSALNNCPLQQNHTLYKQRASSPIPVTIVPDLFKEARSNQKRFSTPDPQIKREIFKGIKGKLFNTEPQVTGAIKSTSSPNTRPQIDLGSMMKVFEKPKNRKESTWTKYFDYGGGGRVTALETSSEWNVDLSKLFLGLRFAHGAHSRLYHGVYNDEPVAVKIIRIPDDDENGAMEVRLGKQFFREVTLLSRLHHPNVIKFVAARREPPVYCVITEYLSGGSLRTYIRKNENISLSLQKLIAIALDIARGMEYIHSQGVIHRDLKPGNVLVDQENHLKVADFGIACEEAYCDLVAGVHGTYRWMAPEMIKQKSYGRKVDVYSFGLILWEMLAGKIPYEDMNPIQAAFAVISKNLRPIIQSDCPPALRDLIDQCWALQPEKRPEFWQIVKVLEQFESSLARDGTLSLIQNLTCQDHKKGLLHWIQKLGSANSHTSPKIA | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5633418 | 5636883 | + | Conep06aG0104900.1 | Cone6ag1010 | 439894 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1010 | 505 | SUPERFAMILY | Protein kinase-like (PK-like) | 188 | 458 | IPR011009 | - | |
Cone6ag1010 | 505 | MobiDBLite | consensus disorder prediction | 44 | 68 | - | - | |
Cone6ag1010 | 505 | ProSiteProfiles | Protein kinase domain profile. | 202 | 462 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | SMART | serkin_6 | 202 | 461 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | Gene3D | Phosphorylase Kinase; domain 1 | 191 | 286 | - | - | |
Cone6ag1010 | 505 | PRINTS | Tyrosine kinase catalytic domain signature | 320 | 338 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | PRINTS | Tyrosine kinase catalytic domain signature | 366 | 376 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | PRINTS | Tyrosine kinase catalytic domain signature | 282 | 295 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | PRINTS | Tyrosine kinase catalytic domain signature | 385 | 407 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | PRINTS | Tyrosine kinase catalytic domain signature | 429 | 451 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | MobiDBLite | consensus disorder prediction | 47 | 68 | - | - | |
Cone6ag1010 | 505 | Pfam | Protein tyrosine and serine/threonine kinase | 209 | 458 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 326 | 338 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1010 | 505 | CDD | STKc_MAP3K-like | 209 | 458 | - | - | |
Cone6ag1010 | 505 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 67 | 460 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone6ag1010 | 505 | Gene3D | Transferase(Phosphotransferase) domain 1 | 287 | 492 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0260 | Cone-Chr4:1162492 | Cone6ag1010 | Cone-Chr6:5633418 | 6.14E-62 | dispersed | |
Cone5ag1835 | Cone-Chr5:12907493 | Cone6ag1010 | Cone-Chr6:5633418 | 1.11E-104 | dispersed | |
Cone6ag1010 | Cone-Chr6:5633418 | Cone7ag1915 | Cone-Chr7:12257561 | 5.62E-69 | dispersed | |
Cone1ag0167 | Cone-Chr1:930630 | Cone6ag1010 | Cone-Chr6:5633418 | 3.15E-230 | wgd | |
Cone12ag1487 | Cone-Chr12:10611532 | Cone6ag1010 | Cone-Chr6:5633418 | 2.29E-40 | wgd | |
Cone5ag1705 | Cone-Chr5:12117338 | Cone6ag1010 | Cone-Chr6:5633418 | 1.71E-227 | wgd | |
Cone6ag1010 | Cone-Chr6:5633418 | Cone8ag1535 | Cone-Chr8:11531445 | 8.25E-42 | wgd | |
Cone6ag1010 | Cone-Chr6:5633418 | Cone9ag1008 | Cone-Chr9:5263645 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82941 | PF03479 | PCC | 3.30E-23 | CL0615 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1010 | - | - | - | 0.0 |