Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1029 | ATGAGTTGTAGCTGCTTTGGTTCCTCCTCTGTCCTTGAGAGAAAGCGGAAATCTTCTCATTCTCATGACTACATTGATGGTGATTTACTTGAAAATATTACACATTTCTCCTATGATGAGCTGAAATCGGCAACCAATAATTTTTATTCTGGCAATAAGTTAGGACGTGGAGGTTTTGGAACTGTTTACAAGGGTGTTTTAAGAAGTGGAAGAGAAGTTGCCGTGAAAAATCTTTCGGCTGAGTCGAAGCAAGGAGTGAGAGAATTTTTGACAGAGATTAAAACCATATCAAATGTTCATCATCCGAATCTTGTTGAGTTGGTTGGGTGTTGTGTTGAAGGAGCTCACCGGGTTTTGGTCTATGAATTTGTTGAAAATAATAGTCTTGACCGAGCGTTATTAGGATCAAGGAGTACGAGCATCGGATTGGATTGGAAAAAAAGGTCTACTATCTGCATTGGTGTTGCCAAGGGTCTTAAGTTCCTTCATGAAGAACTTGTTCCTCACATTGTACATAGAGACATCAAAGCAAGTAACATACTTCTTGAGAAAGACTTCAATCCAAAAATCGGCGACTTCGGATTGGCTAAACTTTTTCCAGACAACATCACTCATATCAGCACAAGAATTGCCGGAACAACTGGTTATTTGGCTCCAGAATATGCATTAGGTGGTCAACTAACCATGAAAGCTGATGTCTATAGTTTTGGAGTTCTAGTACTTGAAATAATTAGCGGAAGATGGAGTGGACGAGCATATTGTGGAGATACGCAGAAATTGCTTCTCGAATGGACATGGGAGCTATATGAAAAGGGAGCACTCTTAGATCTAGTCGATGAACAGCTACATGAGTTTCCTCAAGAAGAAGTAATTAGGTACATAAAGGTAGCCCTGTTTTGCACCCAAGCAACTGCAAGTCAGAGGCCATTGATGAGCCAGGTTTTTGAGATGTTCACAAGGAACATCAGACTCAATGAAAAGCTCCTATCTGCTCCCGGGGTTTTCCAGGATTCAGGTTCTTTAAGTAAGAAATCGATAACTGATACGAGCAGCCGTCAGATGAGCTCAGCCCCAGTTACTATTACACAAGTGATCCCTAGATGA | 1104 | 40.94 | MSCSCFGSSSVLERKRKSSHSHDYIDGDLLENITHFSYDELKSATNNFYSGNKLGRGGFGTVYKGVLRSGREVAVKNLSAESKQGVREFLTEIKTISNVHHPNLVELVGCCVEGAHRVLVYEFVENNSLDRALLGSRSTSIGLDWKKRSTICIGVAKGLKFLHEELVPHIVHRDIKASNILLEKDFNPKIGDFGLAKLFPDNITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLVLEIISGRWSGRAYCGDTQKLLLEWTWELYEKGALLDLVDEQLHEFPQEEVIRYIKVALFCTQATASQRPLMSQVFEMFTRNIRLNEKLLSAPGVFQDSGSLSKKSITDTSSRQMSSAPVTITQVIPR | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5801684 | 5805009 | + | Conep06aG0107000.1 | Cone6ag1029 | 439913 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1029 | 367 | Pfam | Protein tyrosine and serine/threonine kinase | 51 | 316 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1029 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 31 | 337 | IPR011009 | - | |
Cone6ag1029 | 367 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 124 | 330 | - | - | |
Cone6ag1029 | 367 | FunFam | cold-responsive protein kinase 1 | 18 | 123 | - | - | |
Cone6ag1029 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 170 | 182 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1029 | 367 | ProSitePatterns | Protein kinases ATP-binding region signature. | 54 | 76 | IPR017441 | GO:0005524(InterPro) | |
Cone6ag1029 | 367 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 123 | - | - | |
Cone6ag1029 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 124 | 329 | - | - | |
Cone6ag1029 | 367 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 19 | 354 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
Cone6ag1029 | 367 | SMART | serkin_6 | 48 | 318 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1029 | 367 | CDD | STKc_IRAK | 54 | 320 | - | - | |
Cone6ag1029 | 367 | ProSiteProfiles | Protein kinase domain profile. | 48 | 324 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1396 | Cone-Chr13:10114667 | Cone6ag1029 | Cone-Chr6:5801684 | 2.79E-135 | dispersed | |
Cone19ag1385 | Cone-Chr19:9145092 | Cone6ag1029 | Cone-Chr6:5801684 | 2.38E-142 | dispersed | |
Cone6ag0186 | Cone-Chr6:887390 | Cone6ag1029 | Cone-Chr6:5801684 | 8.45E-121 | dispersed | |
Cone6ag1029 | Cone-Chr6:5801684 | Cone9ag0212 | Cone-Chr9:902408 | 4.42E-124 | dispersed | |
Cone6ag1029 | Cone-Chr6:5801684 | Cone9ag1025 | Cone-Chr9:5436810 | 2.45E-245 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82942 | PF00230 | MIP | 1.50E-82 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1029 | - | - | - | 0.0 |