Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1054 ATGCAGACTAGGTATATGGAAAGATCGAACAGTATGGCGAGAGAAAAGAGAGGTTTAGATCCAGCTTCCGCTGAAGAAGGTCAGTCCGAGAGGAAAAGACCTGCTTTAGCCAGTGTAATAGTTGAAGCTCTCCAGGTGGACAGTCTACAGAAACTCTGCTCGTCATTGGAGCCTATCCTTAGAAGAGTAGTTAGTGAAGAAGTGGAGCGCGCTTTAGCAAAACTAGGACCTGCTCAACTTACAGGAAGGTCTTCTCCAAAATGTATTGAAGGGCCTGATGGAAGAAACTTGCAGCTACACTTCAGGTCAAGGTTGTCTCTTCCTCTCTTTACTGGTGGGAAAGTAGAAGGGGAGCAAGGCGCTGCAATCCATGTTGTTCTAATTGATGCAAACACCAACCGTGTAGTCACATCAGGTCCAGAGTCCTCAGTGAAGCTAGATATCATTGTGCTTGAAGGTGATTTCAACAGTGAAGATGATGATAACTGGACTGAAGAAGAGTTTGACAGTCATGTCGTTAAGGAGCGTGAAGGAAAGAGGCCCCTTCTAAATGGGGATTTGCAAGTTACTCTGAAGGAAGGTGTGGGAACACTAGGGGAGCTGACTTTTACTGACAACTCTAGCTGGATAAGAAGCAGGAAATTCAGGCTGGGTCTGAAGGTTGCATCAGTGAACTGTGAGGGCATTCGCATACGTGAAGCAAAAACAGATGCCTTCACTGTTAAGGATCACCGTGGAGAATTATACAAAAAGCATTATCCACCTGCCCTGAGTGATGAGGTCTGGAGATTGGAGAAGATTGGAAAAGATGGATCGTTTCACAAAAAGCTGAATAAAGCTGGAATACATACTGTTGAGGACTTTCTGAGGCTAGCAGTTAGAGACTCACAAAGGTTGCGGAATATTCTTGGTAGTGGCATGTCAAATAAGATGTGGGATGTTCTTGTAGAGCATGCAAAGACCTGTATTCTAAGTGGGAAACTCTATGTTTACTATCCCGATGATGCAAGGAATGTTGGTGTGGTTTTTAACAATATCTATGAACTGAGTGGCTTAATCACTAATGGACAGTATCACTCATCTGATGTTCTCTCCGACAGTCAGAAGGTATATGTGGATACTTTGGTTAATAAGGCATATGACAACTGGACGCATGTTATTGAGTATGATGGCGCATCTCTTCTAAGCTTTAAGCAGAATACAATCTCAGGCACCCCTCAAACTGAGGATCCAATTAGCTCACAAGGTTACTCAAACGCCTTCAATCAGCAGTATGGACTACCAAGCCTGCCAGCTTCCATTCCGTCAGAGCAGCCATCTCTGGATTCAGTCATCCCAGATGGAGGTTACAACAACAATATGGCCTCAGAATTCACAGCCCAATCACAGAACTTGAATCTCAATACTCCTACAATGCAAATTGGTGGCCCCAATTCATTCCCTTCACAAAACCAATTAATCAGCCTTTCACAGGGACCTCTCTTTTCAAGAACCGAAAACATGCTAGCACTTGGTCAACAACCATCCACATCATCATATTTCCAGACAGTCAACACAACGTCCAATCTTCCTTGTAAACAACCATCCACATCATCATCATATTTCCAGACAGTCAACACATCTTCCAATCTTCCTTACAAGGGACCCACAGAAGATTTCTTCTCCGAGGAAGAAATCCGTATGAGAAGCCATGAGATTCTCGAAAACGATGATATGCAACATCTCCTTAGAATATTCAACATGGGAGAAAACAGCCATGGTCCCACCTCCTCCACAAATGCTATAGGTGACAACAATTACCCCTATTTATCCTCATCTTCCACGTATATGCCTACTACTCCGTCTATAAACTACAATTTCGAGGATGAACGGACCAGATCATCCGGAAAAGCTGTTGTGGGTTGGCTTAAGCTCAAGGCGGCTCTTCGATGGGGCATTTTCGTTAGGAAGAAAGCAGCTGAAAGACGGGCTCAGCTTGTGGAGCTGGATGACTGA 1995 44.16 MQTRYMERSNSMAREKRGLDPASAEEGQSERKRPALASVIVEALQVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAQLTGRSSPKCIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLIDANTNRVVTSGPESSVKLDIIVLEGDFNSEDDDNWTEEEFDSHVVKEREGKRPLLNGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASVNCEGIRIREAKTDAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKKLNKAGIHTVEDFLRLAVRDSQRLRNILGSGMSNKMWDVLVEHAKTCILSGKLYVYYPDDARNVGVVFNNIYELSGLITNGQYHSSDVLSDSQKVYVDTLVNKAYDNWTHVIEYDGASLLSFKQNTISGTPQTEDPISSQGYSNAFNQQYGLPSLPASIPSEQPSLDSVIPDGGYNNNMASEFTAQSQNLNLNTPTMQIGGPNSFPSQNQLISLSQGPLFSRTENMLALGQQPSTSSYFQTVNTTSNLPCKQPSTSSSYFQTVNTSSNLPYKGPTEDFFSEEEIRMRSHEILENDDMQHLLRIFNMGENSHGPTSSTNAIGDNNYPYLSSSSTYMPTTPSINYNFEDERTRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6149450 6154276 - Conep06aG0109700.1 Cone6ag1054 439938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1054 664 Pfam Calmodulin binding protein central domain 257 322 IPR046830 -
Cone6ag1054 664 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Cone6ag1054 664 PANTHER OS02G0177800 PROTEIN 14 656 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone6ag1054 664 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Cone6ag1054 664 MobiDBLite consensus disorder prediction 1 32 - -
Cone6ag1054 664 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0807 Cone-Chr10:4094750 Cone6ag1054 Cone-Chr6:6149450 7.08E-87 dispersed
Cone13ag0122 Cone-Chr13:717559 Cone6ag1054 Cone-Chr6:6149450 2.41E-94 dispersed
Cone16ag0349 Cone-Chr16:4841641 Cone6ag1054 Cone-Chr6:6149450 3.52E-57 dispersed
Cone16ag0372 Cone-Chr16:6107067 Cone6ag1054 Cone-Chr6:6149450 5.45E-285 dispersed
Cone16ag0460 Cone-Chr16:6858625 Cone6ag1054 Cone-Chr6:6149450 1.42E-193 dispersed
Cone19ag0124 Cone-Chr19:690718 Cone6ag1054 Cone-Chr6:6149450 1.15E-101 dispersed
Cone1ag1543 Cone-Chr1:57352727 Cone6ag1054 Cone-Chr6:6149450 4.01E-96 dispersed
Cone2ag0623 Cone-Chr2:3944448 Cone6ag1054 Cone-Chr6:6149450 9.94E-283 dispersed
Cone2ag0732 Cone-Chr2:33001012 Cone6ag1054 Cone-Chr6:6149450 3.30E-113 dispersed
Cone2ag0885 Cone-Chr2:34752469 Cone6ag1054 Cone-Chr6:6149450 1.66E-107 dispersed
Cone3ag0829 Cone-Chr3:4250414 Cone6ag1054 Cone-Chr6:6149450 1.04E-77 dispersed
Cone5ag0067 Cone-Chr5:327598 Cone6ag1054 Cone-Chr6:6149450 6.85E-99 dispersed
Cone1ag0127 Cone-Chr1:711425 Cone6ag1054 Cone-Chr6:6149450 1.59E-160 wgd
Cone5ag1738 Cone-Chr5:12354027 Cone6ag1054 Cone-Chr6:6149450 5.70E-165 wgd
Cone6ag1054 Cone-Chr6:6149450 Cone9ag1050 Cone-Chr9:5685892 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1054 - - - 0.0