Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1067 ATGGAAAAAATTAAGTGCGGAAAAAGCCTCTTCTTGTCTCCATCAATTTTCTGCACTTTGATATCTTTCTTTTTACAAACTTCAGCTTCAACTGACACCATATCTACAACGCAGTTCATCAACGGAAGCCAAACCCTAGTTTCAAACGGCCAAAATTTTGTACTCGGCTTCTTTGCTAGAGATGCATATAATCAATACTTGGGAATTTGGTACAAGAACATCCCTCAAACTGTAGTTTGGGTAGCAAACCGAGAAAACCCAGTTGTCAATTCAACCGGGCTATTGACATTTGCAAGTGATGGAAATCTCATCATTCAAAACCAGGCCGGGCATATTTTATGGTCTTCAAATACTGCACAAGTAATAGCCAATCCGATTGCTCGGTTATTAGATTCAGGTAACTTTGTTTTGATTAATGATAGTGTTAATAACTCTGAGGAGTATTTGTGGCAGAGTTTTGATTATCCTTCTGATACTCTTTTGCCGGGTCAGAAACATGGGTGGAACTTGAAAACGGGTTTGAATCGGAAATTGACATCATGGAAAGGACCAGATGATCCTTCACCTGGAGAGTATACTTTTACCGTGGAATTATATGGCTTTCCTCAAGTTTTTATTCGAAAGGGATCGACCATATTGTACCGAACTGGGCCATGGACTGGAAAACTGTTTAATGCTGGTGGGAATATGATTCCGAATACAGTTTTCGATCCAATATTTGTGTATACTAAGAATGAAGTGTACTATACATTTGAAGGAACGAGCAATAACACCTCAAGATATGTTTTATACTCATCCGGGTTAGTTCAACACACTATATGGACTAACTCAAGTTGGAGCCCTGTTTTCACTCCTCGAGAAGATCGCTGCGACGATTATAACCAATGTGGTGTTTATGGGAGTTGTGAAATGATTCCTTTTACAAATTGTGAGTGTTTAAGCGGGTTTGAGCCCCGATTTCCTCAAGACTGGAATAAGTTTGTGTGGTCAGGGGGATGTGTGAGGAAGGATTTAAATATTTGCGGGAATGGAGAGGGTTTCACAAAGTTCTCGGGACTTAAACTTCCTGAAGCATTGGAGAATAAATTAGACGTTACTAATTTAAGTATTAAAGATTGTGAGGCCAAGTGTTTGAGCGATTGTTCTTGCATGGCCTATGCTCAACTAGACTTGACTGGGATTGGAACTAGCTGTGTCACTTGGTATGAAGGTTTGAATGATATTCGAGTAGCTACTGCAAATGGTCAAGATCTCTACGTGAGGGTCGCTGCTTCCTCATTAGCTCACTTGGCAAAATATGGATTTATCATTACCGATGCTCGGAATCGGAATCGAGAGAATGGCATTGAGATGCCATTATTCGATTTTGCCATCATTGAAGTTGCCACAAACAACTTCTCGACTTCTAATAAAATTGGAGAAGGTGGATTTGGACCTGTCTACAAGGGAGAGCTTCTCTCCGGACAAGAAGTTGCAGTAAAAAGGCTATCACAAAATTCTGGGCAAGGCCTAGAAGAGTTTAAGAATGAGGTTCTTCTGATTTCAAATCTTCAACATAGAAATCTTGTCAATCTCCTTGGCTGCTGTATTCAAGGAGAAGAAAGACTATTAATTTATGAGTATATGTCCAACAAAAGCTTAGACAACTTCATTTTCGATGATACAAGGCGTTCTTTGCTAAAATGGAATCAAAGACTAGAAATTATTATTGGCATTGCTCGGGGGCTGCTTTATCTTCACAGGGACTCGAGACTCCGAATCATACATAGAGATCTAAAAATCAGCAATATTTTGTTAGACAGTGAGATGAATCCTAAAATATCTGACTTTGGGATGGCTAGAATATTTGGTGAAGATCAAACTAAAACAAGAACAAGAAGGGTTGTCGGAACCTATGGTTATATGTCTCCGGAGTATGCAATAGATGGATACTTTTCGATAAAATCCGATGTATTTAGCTTTGGAGTTGTAGTTTTGGAGATAATTAGTGGTAAGAGGAATAGAGGGTTTTTCCATCCAGATCATCAGCTAAATCTACTCGGGCATGCATGGCAACTGTGGAATGAAGAAAAGGCTTTGGAATTAATGGATACAGACTTAGAAAATGAATTTTCGGATTTAGAAGCAATGAGATGTATTAATGTTGGTCTTTTATGTGTTCAACAGCGCCCGGAAGACAGGCCGACAATGTCGTCTGTTCTTTTGATGTTGGATAATGGCACTGACTTGATAACAAAACCAGGGAAACCGGGATTTTATTCAGACAGGACTATTTACGAGAGATATTCTCCAGTAACTGAAAATATGGCCTGTTGTTCAAATGAGGTAACCATTTCGTTGTTATATGGTCGTTAA 2355 39.19 MEKIKCGKSLFLSPSIFCTLISFFLQTSASTDTISTTQFINGSQTLVSNGQNFVLGFFARDAYNQYLGIWYKNIPQTVVWVANRENPVVNSTGLLTFASDGNLIIQNQAGHILWSSNTAQVIANPIARLLDSGNFVLINDSVNNSEEYLWQSFDYPSDTLLPGQKHGWNLKTGLNRKLTSWKGPDDPSPGEYTFTVELYGFPQVFIRKGSTILYRTGPWTGKLFNAGGNMIPNTVFDPIFVYTKNEVYYTFEGTSNNTSRYVLYSSGLVQHTIWTNSSWSPVFTPREDRCDDYNQCGVYGSCEMIPFTNCECLSGFEPRFPQDWNKFVWSGGCVRKDLNICGNGEGFTKFSGLKLPEALENKLDVTNLSIKDCEAKCLSDCSCMAYAQLDLTGIGTSCVTWYEGLNDIRVATANGQDLYVRVAASSLAHLAKYGFIITDARNRNRENGIEMPLFDFAIIEVATNNFSTSNKIGEGGFGPVYKGELLSGQEVAVKRLSQNSGQGLEEFKNEVLLISNLQHRNLVNLLGCCIQGEERLLIYEYMSNKSLDNFIFDDTRRSLLKWNQRLEIIIGIARGLLYLHRDSRLRIIHRDLKISNILLDSEMNPKISDFGMARIFGEDQTKTRTRRVVGTYGYMSPEYAIDGYFSIKSDVFSFGVVVLEIISGKRNRGFFHPDHQLNLLGHAWQLWNEEKALELMDTDLENEFSDLEAMRCINVGLLCVQQRPEDRPTMSSVLLMLDNGTDLITKPGKPGFYSDRTIYERYSPVTENMACCSNEVTISLLYGR 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6274520 6286147 + Conep06aG0111000.1 Cone6ag1067 439951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1067 784 CDD STKc_IRAK 472 739 - -
Cone6ag1067 784 Gene3D Phosphorylase Kinase; domain 1 440 541 - -
Cone6ag1067 784 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Cone6ag1067 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Cone6ag1067 784 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 747 - -
Cone6ag1067 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 153 - -
Cone6ag1067 784 SUPERFAMILY Protein kinase-like (PK-like) 450 756 IPR011009 -
Cone6ag1067 784 CDD PAN_AP_plant 342 423 - -
Cone6ag1067 784 Pfam D-mannose binding lectin 77 182 IPR001480 -
Cone6ag1067 784 Gene3D Transferase(Phosphotransferase) domain 1 542 746 - -
Cone6ag1067 784 ProSiteProfiles Protein kinase domain profile. 466 744 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1067 784 SMART serkin_6 466 737 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1067 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 433 541 - -
Cone6ag1067 784 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Cone6ag1067 784 SMART blect_4 37 156 IPR001480 -
Cone6ag1067 784 Pfam Protein tyrosine and serine/threonine kinase 468 734 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1067 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 745 - -
Cone6ag1067 784 Pfam S-locus glycoprotein domain 214 319 IPR000858 GO:0048544(InterPro)
Cone6ag1067 784 PIRSF SRK 435 784 IPR024171 GO:0004674(InterPro)
Cone6ag1067 784 PIRSF SRK 4 435 IPR024171 GO:0004674(InterPro)
Cone6ag1067 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1067 784 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
Cone6ag1067 784 Pfam PAN-like domain 341 408 IPR003609 -
Cone6ag1067 784 SMART ntp_6 342 422 IPR003609 -
Cone6ag1067 784 CDD B_lectin 37 156 IPR001480 -
Cone6ag1067 784 Gene3D - 26 153 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0386 Cone-Chr6:1878713 Cone6ag1067 Cone-Chr6:6274520 1.14E-94 dispersed
Cone6ag1067 Cone-Chr6:6274520 Cone9ag1058 Cone-Chr9:5768217 0 dispersed
Cone6ag1066 Cone-Chr6:6260212 Cone6ag1067 Cone-Chr6:6274520 2.43E-64 tandem
Cone6ag1067 Cone-Chr6:6274520 Cone6ag1068 Cone-Chr6:6433993 8.41E-111 tandem
Cone5ag1634 Cone-Chr5:11537601 Cone6ag1067 Cone-Chr6:6274520 5.59E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82947 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1067 - - - 0.0