Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1090 ATGATTGTGCTGTTCAAAAGGAGTCTGTCTGAAAAAGAGACAGATAGAAGCTTTGGGCTTAGGAATTTCAGATACATTGAAACCATTAAAGAAGCTGTTGAAAGAGAATGCCCTGGTGTGGTTTCTTGTGCAGATATTCTGGTTCTCTCTGCTAGAGATGGCATCGTTGCGCTAGGAGGCCCTCCTATCCCTCTTAAGACTGGAAGAAGGGATGGAAGAAAGAGCAGAGCTGAAGTGGTTGAACAGTATCTCCCCGACCACAATGAGAGCATTTCTGTTGTTCTTGAAAGGTTTGGAGCAATGGGTATTAGCACATCTGGAGTTGTTGCCTTGCTAGGAGCTCATAGTGTGGGCCGAACACACTGCATGAAGCTGATTCACCGGTTGTACCCGGAGGTGGACCCCACACTTAATCCTGACCATGTCGAGCACATGCTCTACAAGTGCCCGGATGCAATCCCGGACCCAAAGGCTGTTCAATATGTGAGAAATGATCGTGGAACGCCAATGGTGCTGGACAACAATTACTATAGAAACATTTTAGACAACAAGGGATTGTTGATAGTAGATCACCAACTAGCCACAGATTCAAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAAACAAGACTATTTCTTCAAGGAGTTCTCAAAAGCTATTAGGACTCTCTCCGAAAACAACCCTCTCACTGGCTCTAAAGGTGAGATCAGAAAGCAATGCAATGTTGCCAACAAGCTCCATTAG 747 45.25 MIVLFKRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVALGGPPIPLKTGRRDGRKSRAEVVEQYLPDHNESISVVLERFGAMGISTSGVVALLGAHSVGRTHCMKLIHRLYPEVDPTLNPDHVEHMLYKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLATDSRTKPYVKKMAKKQDYFFKEFSKAIRTLSENNPLTGSKGEIRKQCNVANKLH 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6646757 6648777 - Conep06aG0113400.1 Cone6ag1090 439974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1090 248 FunFam Peroxidase 85 224 - -
Cone6ag1090 248 PRINTS Plant peroxidase signature 21 34 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 40 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 59 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 106 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 179 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Plant peroxidase signature 219 232 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 SUPERFAMILY Heme-dependent peroxidases 9 245 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 ProSiteProfiles Plant heme peroxidase family profile. 1 245 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PANTHER - 10 244 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 Gene3D - 9 245 - -
Cone6ag1090 248 Pfam Peroxidase 8 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 CDD secretory_peroxidase 10 243 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone6ag1090 248 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Haem peroxidase superfamily signature 41 58 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Haem peroxidase superfamily signature 59 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1090 248 Gene3D Peroxidase, domain 2 85 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1277 Cone-Chr13:9610842 Cone6ag1090 Cone-Chr6:6646757 1.51E-63 dispersed
Cone19ag1264 Cone-Chr19:8643198 Cone6ag1090 Cone-Chr6:6646757 4.60E-102 dispersed
Cone6ag1090 Cone-Chr6:6646757 Cone11ag0046 Cone-Chr11:222204 4.82E-44 dispersed
Cone6ag1090 Cone-Chr6:6646757 Cone8ag1448 Cone-Chr8:11200470 2.09E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1090 K00430 - csv:101214168 462.611