Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1091 | ATGTTGGCCCCTTCAAAAACCTCTCTCGCCGACGCTTACGCACTTTCCTCCCGTTCTTTTCTCAACCCTTTCCGTCTGCGTTCTTCGCCCACAACAATCACAACTACCCCGTGCGGCAGGTCGTCTTGGGTGAACCCGGTTCAATGTGGTCTAAGAGAAATTCGAGACCGTATTGACTCAGTCAAGAACACTCAGAAGATCACAGAAGCTATGAAACTTGTGGCTGCTGCTAAAGTCCGGCGAGCTCAAGAAGCAGTCGTGAATGGCAGACCCTTCTCAGAAACCCTAGTTGGAGTCCTTTACAGCATCAATGAACAGCTCCAAACTGAAGATGTAGATGTTCCTTTAACAAGCGTACGGCCCGTTAAGAAAGTTGCCTTGGTTGTTGTCACAGGTGATCGAGGACTTTGTGGCAGTTTCAATAACTCGATCTTAAAAAAAGCCGAAGCGAGAATCAAAGAGTTGAAAGCTCTCGGCCTAGAATATACCGTTATAAGCGTCGGCAAAAAGGGAAACACCTATTTTCTCCGCCGGCCTTTTATCCCAGTCGATATGTTTCTAGAAGGTGGAACTCTTCCTACTGCTAAAGAAGCTCAAGCGATAGCCGACGATGTTTTTTCACTTTTCATAAGTGAAGAGGTCGATAAAGTCGAGCTTCTCTACACAAAATTCGTCTCTCTTGTTAAATCCAATCCTGTCATTCACACGCTTCTTCCATTATCCCCCAAGGGAGAGATATGTGATATAAACGGCGTTTGCGTAGATGCAGCTGAGGATGAGTTTTTTAGGTTAACAACGAAAGAAGGAAAGTTGACGATAGAGATGGATACTGTGAAAACGCAGACAGAAGATTTTTCCCCAATTTTGCTGTTTGATCAGGATCCCGTTCAGATTCTTGATGCTTTGTTGCCGTTGTATTTAAACAGTCAGATTTTGAGGGCCTTACAGGAGTCTTTAGCGAGTGAACTTGCGGCGAGGATGACTGCTATGAGTAACGCAACCGATAATGCAGACGAGTTGAAGAAAACTTTGTCTATGGTGTATAATAGGCAACGACAGGCGAAAATCACCGGAGAAATATTGGAGATTGTTGCTGGTGCTAACGCTTTATCGTAG | 1116 | 44.89 | MLAPSKTSLADAYALSSRSFLNPFRLRSSPTTITTTPCGRSSWVNPVQCGLREIRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVGVLYSINEQLQTEDVDVPLTSVRPVKKVALVVVTGDRGLCGSFNNSILKKAEARIKELKALGLEYTVISVGKKGNTYFLRRPFIPVDMFLEGGTLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSNPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTIEMDTVKTQTEDFSPILLFDQDPVQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNADELKKTLSMVYNRQRQAKITGEILEIVAGANALS | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6652794 | 6654507 | + | Conep06aG0113500.1 | Cone6ag1091 | 439975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1091 | 371 | FunFam | ATP synthase gamma chain, chloroplastic | 267 | 370 | - | - | |
Cone6ag1091 | 371 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 50 | 370 | IPR035968 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | FunFam | ATP synthase gamma chain, chloroplastic | 118 | 241 | - | - | |
Cone6ag1091 | 371 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 5 | 370 | IPR000131 | GO:0000275(PANTHER)|GO:0009535(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER) | |
Cone6ag1091 | 371 | Pfam | ATP synthase | 51 | 370 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | Hamap | ATP synthase gamma chain [atpG]. | 48 | 370 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 50 | 115 | - | - | |
Cone6ag1091 | 371 | CDD | F1-ATPase_gamma | 51 | 367 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | FunFam | ATP synthase gamma chain, chloroplastic | 49 | 116 | - | - | |
Cone6ag1091 | 371 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 266 | 370 | - | - | |
Cone6ag1091 | 371 | ProSitePatterns | ATP synthase gamma subunit signature. | 356 | 369 | IPR023632 | - | |
Cone6ag1091 | 371 | NCBIfam | ATP synthase F1 subunit gamma | 50 | 370 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | PRINTS | ATP synthase gamma subunit signature | 348 | 369 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | PRINTS | ATP synthase gamma subunit signature | 215 | 232 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | PRINTS | ATP synthase gamma subunit signature | 317 | 336 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | PRINTS | ATP synthase gamma subunit signature | 122 | 141 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cone6ag1091 | 371 | Gene3D | - | 116 | 241 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0006 | Cone-Chr1:78278 | Cone6ag1091 | Cone-Chr6:6652794 | 1.30E-194 | dispersed | |
Cone5ag1860 | Cone-Chr5:13031201 | Cone6ag1091 | Cone-Chr6:6652794 | 4.04E-189 | dispersed | |
Cone6ag1091 | Cone-Chr6:6652794 | Cone9ag0067 | Cone-Chr9:316838 | 2.70E-128 | dispersed | |
Cone16ag0209 | Cone-Chr16:1403310 | Cone6ag1091 | Cone-Chr6:6652794 | 3.62E-13 | transposed | |
Cone2ag0804 | Cone-Chr2:34047874 | Cone6ag1091 | Cone-Chr6:6652794 | 9.32E-12 | transposed | |
Cone6ag0055 | Cone-Chr6:304524 | Cone6ag1091 | Cone-Chr6:6652794 | 6.96E-183 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1091 | K02115 | - | csv:101214408 | 588.186 |