Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1118 | ATGTCAACGAGGTCGTCCACCACGAGCAGGACTCGAGTGGGGAGGTACGAGCTGGGCCGGACTCTCGGAGAGGGGAATTTTGCTAAGGTTAAGTTCGCGCGCAATTTGGAGACCAACGAGAACGTAGCGATCAAAATCCTTGACAAAGAGAAGGTTCTCAAGCACAAGATTATCGGTCAGATTAAGCGTGAGATATCAACGATGAAGTTAATTAGACATCCAAATGTCATCCGTATGTATGAGGTGATGGCTAGCAAGACAAAAATATATATAGTTTTGGAATTTGTGACTGGTGGTGAGCTGTTTGACAAAATTGCTAGTAAAGGGAGGCTGAAAGAAGATGAAGCAAGGAAATATTTCCAGCAGCTTATAAATGCTGTGGATTATTGTCATAGCAGAGGGGTTTTCCATAGAGATCTTAAGCCAGAGAATTTGCTTCTGGATGCTAACGGAACTCTTAAAGTTTCAGACTTTGGATTGAGTGCGCTACCTCAACAACTGGGTGAGGACGGACTACTACACACAACTTGTGGAACACCAAATTATGTTGCTCCAGAGGTTATCAACAACAAAGGCTATGATGGTGCAAAGGCGGATTTATGGTCATGTGGTGTAATTCTTTTTGTCCTAATGGCCGGCTATTTGCCTTTTGAAGATTCCAACCTCATGGCATTGTATAAAAAGATATTTAAAGCCGACTTCACATGTCCACCTTGGTTCTCAACAAGTGCAAAGAAACTAATCAAAAGAATCCTGGAGCCTGATCCCTCAAAGAGAATTACAGTGGCAGAGGTCATTGAAAATGAGTGGTTTAAGAAAGGATATAAGCCGCCCAGTTTTGGGCAAGCTGATGTCACTCTTGATGATGTAGATGCTGTCTTCAATGAATCTATGGATTCTGGTAACTTTATCGTTGAGAGGAGGGAAGAAGGACCTGTTTCACCTGTCACCATGAATGCGTTTGAGCTCATCTCTACTTCTCAGGGCCTCAACCTCAGCACTCTTTTTGAAAAGCAGATGGGGCTTGTTAAACGAGAAACGAGATTCACATCTAACCGTCCTGCGAATGAGATAATTTCAAAAATTGAGGAAGCTGCAATGCCTTTGGGTTTTGGTGTGAAGAAAAATAACTTCAAGATGAAACTTAAAGGGGAAAAAAGTGGCCGTAAAGGTCAATTATCTGTTGCGACAGAGATTTTTGAGGTGGCCCCATCACTCTACATGGTTGAACTTCGAAAGGCTTGTGGAGATACCTTGGAATTTCACAAGTTCTATAAGAACCTTTCGACCGGGCTAAAAGATATTGTCTGGAAACACGGAGACAGTGAAGAGGAAGAAAATAGTGGTGCTGTTCCAGCTGTTCCAGCTGTTCCAAAATCTTCTGCGTAA | 1389 | 42.69 | MSTRSSTTSRTRVGRYELGRTLGEGNFAKVKFARNLETNENVAIKILDKEKVLKHKIIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDANGTLKVSDFGLSALPQQLGEDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLMALYKKIFKADFTCPPWFSTSAKKLIKRILEPDPSKRITVAEVIENEWFKKGYKPPSFGQADVTLDDVDAVFNESMDSGNFIVERREEGPVSPVTMNAFELISTSQGLNLSTLFEKQMGLVKRETRFTSNRPANEIISKIEEAAMPLGFGVKKNNFKMKLKGEKSGRKGQLSVATEIFEVAPSLYMVELRKACGDTLEFHKFYKNLSTGLKDIVWKHGDSEEEENSGAVPAVPAVPKSSA | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7140717 | 7148246 | + | Conep06aG0116200.1 | Cone6ag1118 | 440002 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1118 | 462 | FunFam | Non-specific serine/threonine protein kinase | 7 | 95 | - | - | |
Cone6ag1118 | 462 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1118 | 462 | FunFam | Non-specific serine/threonine protein kinase | 312 | 438 | - | - | |
Cone6ag1118 | 462 | Gene3D | Kinase associated domain 1, KA1 | 313 | 438 | - | - | |
Cone6ag1118 | 462 | FunFam | Non-specific serine/threonine protein kinase | 9 | 311 | - | - | |
Cone6ag1118 | 462 | Pfam | NAF domain | 315 | 375 | IPR004041 | GO:0007165(InterPro) | |
Cone6ag1118 | 462 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 284 | IPR011009 | - | |
Cone6ag1118 | 462 | ProSiteProfiles | NAF domain profile. | 313 | 337 | IPR018451 | GO:0007165(InterPro) | |
Cone6ag1118 | 462 | MobiDBLite | consensus disorder prediction | 443 | 462 | - | - | |
Cone6ag1118 | 462 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 8 | 426 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone6ag1118 | 462 | CDD | STKc_SnRK3 | 15 | 270 | - | - | |
Cone6ag1118 | 462 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 95 | - | - | |
Cone6ag1118 | 462 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1118 | 462 | CDD | CIPK_C | 319 | 434 | - | - | |
Cone6ag1118 | 462 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1118 | 462 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1118 | 462 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 278 | - | - | |
Cone6ag1118 | 462 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0676 | Cone-Chr14:3489720 | Cone6ag1118 | Cone-Chr6:7140717 | 3.33E-154 | dispersed | |
Cone15ag0687 | Cone-Chr15:3700415 | Cone6ag1118 | Cone-Chr6:7140717 | 1.32E-148 | dispersed | |
Cone16ag0476 | Cone-Chr16:6943301 | Cone6ag1118 | Cone-Chr6:7140717 | 1.22E-81 | dispersed | |
Cone1ag0276 | Cone-Chr1:1872727 | Cone6ag1118 | Cone-Chr6:7140717 | 2.52E-224 | dispersed | |
Cone4ag0522 | Cone-Chr4:2338067 | Cone6ag1118 | Cone-Chr6:7140717 | 2.16E-83 | dispersed | |
Cone4ag0668 | Cone-Chr4:3296691 | Cone6ag1118 | Cone-Chr6:7140717 | 2.90E-175 | dispersed | |
Cone6ag1118 | Cone-Chr6:7140717 | Cone7ag0630 | Cone-Chr7:3198882 | 5.74E-180 | dispersed | |
Cone11ag1560 | Cone-Chr11:10850903 | Cone6ag1118 | Cone-Chr6:7140717 | 2.22E-221 | transposed | |
Cone18ag0987 | Cone-Chr18:7258528 | Cone6ag1118 | Cone-Chr6:7140717 | 1.02E-227 | transposed | |
Cone5ag1426 | Cone-Chr5:9014618 | Cone6ag1118 | Cone-Chr6:7140717 | 6.67E-195 | transposed | |
Cone5ag1568 | Cone-Chr5:10936351 | Cone6ag1118 | Cone-Chr6:7140717 | 1.87E-273 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82951 | PF00240 | ubiquitin | 4.80E-09 | CL0072 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1118 | - | - | - | 0.0 |